Vibrio vulnificus YJ016: VV2615
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Entry
VV2615 CDS
T00150
Name
(GenBank) exonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VV2615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV2615
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VV2615
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VV2615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BAC95379
UniProt:
Q7MIA2
LinkDB
All DBs
Position
I:complement(2642053..2645541)
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AA seq
1162 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRLNPLQNPFDKEQILVQSPGMSQWLKMELAKEFGVAANI
EFPLPATFIWDMFTHVLADVPKRSAFNKEAMTWKLMHLLPQQLALAEFSPLARYLQDDEE
GAKLYQLSEKIADIFDGYLVYRPEWIRDWEAGKAVAEIGDEHPWQPMLWQALYDHTVALG
QSPYHRANLYEHFIDSLENYTGQFERLPQRLFVFGITSLPPRYMDALKALGQHIDVHLMF
TNPCRYYWGEVRDRKFLARLAAKQRQHLVWQQDHSQLQGQSEQLKGSIEDNLADELHTEV
VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDIEPDSLLHQLQADILNLEEHQDDDHIE
SSHHKPLIEANDRSLSLHVCHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILNAFLTLVNLPQMRCLASELLELLETPAI
LQKFSLSETEFLQAKQWVEASGIRWGLDEQTGCEFELPQTRQNTWQFGIQRMLLGYAMPE
SAGLFQSGDEWLAPYNEVQGMGAELAGKLSYFIEKVRCYRHALAQAQNIDAWRQQLHGVL
ADFFAVDLEGEVALKSIRDTLGQLKEQLSDAAFEAELSPSVIRQYLLNKLSGSRVSQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSVAPEGFDLIHGRARAGDRSRRDDDRYL
FLEALLSAQQSVYISYVGRSVQDNTEKVPSVLVAELMEYCQQNYCLAGDEHLGVDESGAH
LLKAITCEHPMVPFSPIAFLGEPPSNAKSYAKEWIPAAQQQSEGQVPSQQSAPFYQALDD
YLLGATFPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPMAVMADEEPFVLDGLNSFQLR
EQLLHRLLSDENCTPDMVQPLIEGVRSEMRAQGKLPIGAFGELEFDTNRVQAEALMEKLT
GLSHACLDDLEVDLAFTPFGEGKTIHLSGWLTQHYQSGLLRYRSGKIRSQDYLAGWIDHL
SMSAMGVAKVTHLIGYDKKEGVVHLKYPAMADAGQAKSLLNELIRLYIEGMTQPLAYFPK
TALAAIEAGISRGQWNDDEEKALKKMADTFNDGFLGAGEGADSYISRIWPKWNEQLAHQV
RLMSSLVLQGARLSVVDASEEA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgtttactgtctatcactccaatcaagtggatgtgctcaaatctctattggtggaactg
attcgcctcaatcctttgcaaaatcccttcgacaaagagcaaatcttggtgcaaagccca
ggcatgtctcaatggttgaaaatggaactggcgaaagagtttggtgtggcagcaaacatc
gaatttccgctacccgcgacatttatctgggatatgtttacccacgttttggcggatgtg
ccaaaacgcagtgcttttaacaaagaagcgatgacgtggaagctgatgcatttgttgccg
cagcaacttgcactggcggagttctcgcccttagctcgctatcttcaagacgatgaagaa
ggcgccaagctttaccaactgtcggaaaaaattgccgatatttttgatggttatttggtg
tatcgccctgaatggatacgtgattgggaagcggggaaggccgtggctgagattggtgat
gagcatccttggcagcccatgttgtggcaagcactgtatgaccataccgtcgcgcttggg
caatcgccgtaccatcgcgccaacctatacgaacacttcattgatagcttagaaaactac
actggccagtttgaacgcttgccgcagcgcttgtttgtttttggcattacctcattgccg
ccacgctacatggacgcgcttaaagcgctcggtcagcatattgacgtgcatctgatgttt
accaacccgtgtcgatactattggggtgaagtgcgcgatcgaaaatttctggctcgtttg
gcggcgaaacagcgtcagcatctcgtgtggcaacaagatcattcgcagcttcagggccaa
agtgagcaattgaaaggcagtattgaagacaatcttgccgatgaactgcacaccgaggtg
gtgggcaacagcttgctggcttcgatgggcaaacttggtcgtgacaacatgtacttgttg
tcacaattggaatcgcatgagattgaagcgtttgtcgatatcgaaccagactcgctattg
catcaactgcaagccgacatcctcaacttggaagagcaccaagatgacgaccatatcgag
agcagccatcataaaccgctcatcgaagcgaatgatcgctctttgagcctgcacgtctgc
cacagcccaatgcgtgaagtggaagtgctgcacgatcaattgctggcgatgttcgatgcc
gatcccaccctcaagccgcgtgatattattgtgatggtggcggacatcaatgcctacagc
ccagcgattcaagcggtatttggcaacgcgccgggtgaacgattcatcccctattccatt
tcagatcgaaccgccgatcaagaaagcccgattctcaacgcgtttttgacgttggtgaat
ctaccacaaatgcgctgtttggcgtcagagctgttggaactgctagaaacccctgcgatt
ttgcagaaattttccttgagtgaaacggaattcctgcaagcaaaacagtgggtggaagcg
tcaggtatccgttgggggctcgatgagcaaactggatgtgagtttgagctaccgcagaca
agacaaaacacctggcagtttggtattcaacgcatgttacttggctacgccatgccagaa
tcggctggcttgttccaaagcggtgatgaatggcttgctccttacaacgaagttcaggga
atgggagcggagctggcgggcaaactgagctacttcattgaaaaggtgcgctgctatcgc
cacgccttagctcaagcgcaaaacattgacgcatggcgacaacaattacacggtgtcttg
gcggatttcttcgccgtcgacttagaaggcgaagtggcattgaaatcgattcgcgatacg
ttgggacagttaaaagaacagttgagtgatgcggcatttgaggcggaattgtcaccgagt
gtgattcgtcaatatctactcaataaactgtccggtagccgtgtaagccagcgttttctt
gccggacaagtgaatttttgtaccttgatgccgatgcgttcgattccatttcgcaccgtc
tgtttattagggatgaacgatggcgtctatccacgcagtgtggcaccggaaggattcgat
ttaattcatggccgtgccagagcgggtgatcgctctcgccgcgacgatgaccgctacttg
ttccttgaggccctgttgtctgcgcagcaaagtgtttacatcagctatgtcggacgttca
gtgcaagacaacacagagaaagtgccgtcggtgctggtggctgaattgatggagtattgt
cagcaaaactactgtttagcgggggatgagcatctgggtgtggatgaatccggtgcgcac
ctattaaaggcgatcacttgcgagcatcccatggtgccatttagccccatagctttttta
ggtgaacctccgagcaacgcgaaaagctatgccaaagagtggattccagcggcccagcag
cagagcgaaggccaagtgccgtcgcagcaaagtgcgccattttatcaagcccttgacgat
tatttactgggtgccacgttcccgcttgaactggatttggttgaactgcaacgtttctgg
cgactgccagtgcagtacttcttcaatcgccgtttgaaagtcgttttcgagccgccaatg
gccgtgatggccgatgaagagccgtttgtgttggatgggctcaacagcttccaattgcgt
gaacagttgttgcatcgtctcttatcggatgaaaactgcacgcctgacatggtacagccg
ctgattgagggcgtacgcagtgaaatgcgtgctcagggcaagttgccgatcggcgccttt
ggtgagttggaatttgacaccaaccgcgtgcaagctgaagcgttaatggaaaaactaacc
gggctatctcacgcttgtttggatgatctcgaagtggatctggcttttacgccatttggt
gaaggcaaaacgattcatttgagcggttggttaacgcagcactatcaatcgggtctatta
cgttatcgcagtggcaaaattcgctcacaagattacttagcaggttggattgatcatctt
tcgatgtcggccatgggcgttgccaaagtgacgcatttgattggctacgacaagaaagaa
ggggttgtgcacctcaaatacccagcgatggcggatgctggccaagccaaatccttgctt
aacgaattgatccgcctgtatatcgaaggcatgacccagcctttggcatatttccctaaa
accgcgttggcggccatcgaagctggcataagccgcgggcaatggaacgatgatgaagag
aaagcgttgaaaaaaatggcggataccttcaatgatggtttcttgggcgcaggggaaggc
gctgacagctacatcagtcgtatttggccaaaatggaatgaacaactggcccatcaagta
cgtttgatgagtagtttggtgctgcaaggggcaagattatctgttgtggatgcgtcagag
gaagcataa
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integrated database retrieval system
