Vibrio vulnificus YJ016: VV2925
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Entry
VV2925 CDS
T00150
Name
(GenBank) RNA polymerase-associated protein HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vvy
Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvy03021
]
VV2925
Transcription machinery [BR:
vvy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VV2925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
CC_BshC
COG2_N
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAC95689
UniProt:
Q7MHE6
LinkDB
All DBs
Position
I:complement(2983798..2986707)
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AA seq
969 aa
AA seq
DB search
MAFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYASNDAPVTRVVFNVGDV
VECQEGWSLKVEQVVEENGLYTYLGMREDTEETGVALREIFLSNQIRFNKPQDKMYAGQI
DRMDNFVLRYRALKNQYEQHRSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLLGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFA
ESDNPFDTQQYVLCSLDFLRKSRKRFEQALEADWDLLVVDEAHHLEWSQDKPSRGYQVVE
GLAERTPGVLLLTATPEQLGRESHFARLRLLDSDRFYDYAAFVEEEAQYAPVADAITALF
SGVKLADEAKNQITELLSEQDVEPLFRIIESNADEESKAIARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPVRNVHLLPMPIPTQYTTSMRVSGMIGGKLAPEARAMKNLYPEEIFQEFE
GEESSWWQFDCRVNWLLEKLKAQRSEKVLVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQKRDIDIHVPYLQGTAQEVLARWFNEGLNAFAETCPTGRTVYDQVSDQLIEMLASGS
NEALNDVIAESAKLNQALKADLEQGRDRLLEMHSNGGEKAQQIVAEIAAKDGDTNLVSFA
LSLFDTIGLNQDDKGENAIVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMHFISW
EHPMIQGGIDLLMSEGVGTCAVSLLKNKALPVGTLLLELIYAVDAQAPKRSGIGRFLPRT
PIRLMMDARGNDLSAQVEFESFNRQLSPVNRHLASKLVSSVQNDIHRLIEAGDQLVVENV
EAIRQQAQQEMQQSLNSELERLQALKAVNPNIRDEEIEAIDAQIKELNGYIAKAQFQLDS
LRLIVVSHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgctttggggcagcgctggatcagcgatacggagagcgatttgggtttaggt
acggtagtggcgttagatgctcgcaccgtgacactgatgtttgcagcatcagaagagaac
cgagtttacgccagtaacgatgcgccggtaacccgagtagtttttaatgtcggtgatgtg
gttgagtgtcaagaaggttggtcactcaaagtggaacaagtggtggaagagaacgggtta
tatacctaccttggcatgcgtgaagacactgaagaaactggtgttgcactgcgtgaaatc
ttcctgagcaaccaaattcgttttaataaaccgcaagacaaaatgtacgccggtcaaatc
gatcgcatggacaactttgtgttgcgttaccgcgcactcaaaaatcaatacgaacaacac
cgcagtccaatgcgcggcctctgtggtatgcgtgcgggcttgatccctcatcagctctac
attgcccacgaagtggggcgtcgtcatgcgccacgcgtattgctggcggatgaagtgggt
ttgggcaaaaccattgaagcgggcatgatcattcaccagcaagtgctgcttggccgtgct
gaacgcatcctgattgtggtgccggaaaccctgcaacaccagtggttggtggagatgatg
cgtcgcttcaatctgcatttctctatctttgatgaagaacgctgtatcgaagcgtttgcc
gagtcagataacccatttgatacccagcagtacgtactgtgttcactcgatttcttgcgt
aaaagccgcaagcgttttgagcaagcgcttgaagccgactgggatctgctggtggtggac
gaagcgcaccacctagagtggagccaagacaaaccaagccgtggctaccaagtggtcgaa
gggctagcagaacgcacccctggtgtgttgctgttgaccgcaaccccagaacagcttggc
cgtgagagtcactttgcccgtttgcgccttctcgattcagaccgtttctacgactacgct
gcgttcgttgaagaagaagcgcaatacgcaccggttgcggatgcgattactgcgttattc
tccggcgtgaagctggcggatgaggcgaaaaaccaaattacggaactgctttccgagcag
gacgttgagccgctgttccgcatcattgaaagcaatgcggatgaagagagcaaagcgatc
gctcgccaagagttgattgataatttgatggaccgtcacggcactgggcgtgtcttgttc
cgtaacacccgtgcggcgatcaaaggcttccctgtgcgtaatgtgcacctgttgccgatg
ccgatcccaacccaatacaccacctcgatgcgtgtttcgggcatgatcggtggcaagttg
gccccagaagcgcgtgcgatgaaaaacctctacccagaagagatcttccaagaatttgaa
ggggaagagtcgagctggtggcagtttgactgccgagtaaactggttgctggaaaagctg
aaagcgcaacgcagtgagaaagttttagtgatcgcttcgcgtgccagcacggcattgcag
cttgaacaagcgttgcgtgagcgtgaaggtattcgtgccaccgttttccatgaaggtatg
tccatccttgagcgcgacaaagccgcagcttacttcgcgcaagaagagggcggcgcacag
gtgctgatttgtagtgaaatcggctctgaaggtcgtaacttccaatttgctaaccagttg
gtgatgtttgacctgccattcaacccagatttgcttgaacaacgtattggtcgtttggac
cgtattggtcaaaaacgcgatatcgatattcatgtgccttacctgcaaggaaccgcgcaa
gaagtcttggcgcgttggtttaatgaaggcctcaatgcatttgctgaaacttgcccaaca
ggccgcactgtctatgaccaagtctctgatcaactgatcgagatgttggcatcgggttcc
aatgaggcgttgaatgacgtgattgcggaatcggccaaactgaatcaagcgttgaaagcc
gatcttgagcaagggcgtgaccgtctgttggaaatgcactccaacggtggtgagaaagcg
cagcaaatcgtggcggaaattgccgccaaagatggcgatactaacttagtgagttttgcg
cttagcttgtttgacaccattggtttgaaccaagatgacaaaggtgaaaatgccatcgtg
gtgacgccgtctgagcacatgatggtgccgagctacccaggtttgccgtacgaaggcgcg
acgattaccttcgaccgtgatacggcgttgtcacgcgaagacatgcactttatcagttgg
gaacacccaatgatccaaggcggcattgatttgctgatgagtgaaggggtgggcacctgt
gccgtttctctgctcaagaacaaagcactgccggttggcactttgctgctagagctgatt
tacgcggtggacgcgcaagcgccgaaacgcagtggtattggccgcttcttacctcgcacg
ccaattcgtttgatgatggacgcccgtggcaacgatctctctgcccaagtggagtttgaa
agctttaaccgtcaattgagcccagtgaatcgccatttggcgagcaaattggtttcgtcg
gtacaaaacgatatccatcgtttgattgaagccggtgaccagttggtggtggaaaatgtc
gaagcaattcgtcagcaagcgcagcaagagatgcagcagagccttaatagtgaacttgag
cgtctgcaagcattgaaagcggtcaacccgaacattcgtgatgaagagattgaggcgatt
gacgcgcaaatcaaagagttgaacggttacattgcgaaggcgcaattccaattggattca
ctgcgtctgattgtggtgagccacaactga
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