Vibrio vulnificus YJ016: VV3106
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Entry
VV3106 CDS
T00150
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VV3106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvy03019
]
VV3106
03110 Chaperones and folding catalysts [BR:
vvy03110
]
VV3106
03029 Mitochondrial biogenesis [BR:
vvy03029
]
VV3106
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vvy04147
]
VV3106
Enzymes [BR:
vvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VV3106
Messenger RNA biogenesis [BR:
vvy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VV3106
Chaperones and folding catalysts [BR:
vvy03110
]
Heat shock proteins
HSP60 / Chaperonin
VV3106
Mitochondrial biogenesis [BR:
vvy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VV3106
Exosome [BR:
vvy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VV3106
Exosomal proteins of other body fluids (saliva and urine)
VV3106
Exosomal proteins of breast cancer cells
VV3106
Exosomal proteins of colorectal cancer cells
VV3106
Exosomal proteins of bladder cancer cells
VV3106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
NNH2
Motif
Other DBs
NCBI-ProteinID:
BAC95870
UniProt:
Q7M7I7
LinkDB
All DBs
Position
I:complement(3186809..3188449)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKQVASQANDVAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSKDCSTSTEIEQVGTISANSDSSVGKIIAEAMEKVGRDGVITVEEG
QALHDELDVVEGMQFDRGYLSPYFINNQESGSVELESPFILLVDKKISNIRELLPALEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEVGLELEKATLEDLGQAKRVSITKENTTIIDGVGEEAMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALI
RAASKIVDLQGDNEEQNVGIRVALRAMEAPLRQITKNAGDEESVVANNVRAGEGSYGYNA
ATGVYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDSGMPDMGGMGGM
GGMGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaatgacgctcgcgtaaaaatgctagaaggtgtc
aacattctagctgacgcagtaaaagtaacactgggccctaaaggccgtaacgtggtactc
gacaaatctttcggtgcaccaacgattacaaaagatggtgtatcggtcgcgcgtgaaatt
gaacttgaagacaagttccaaaacatgggcgcacaaatggtgaagcaagtggcttcacaa
gcaaacgacgtcgcgggtgacggtacgacaacggcgacggtacttgcgcaagctatcgta
aatgaaggtcttaaagcggttgctgcgggtatgaacccaatggaccttaagcgtggtatc
gacaaagctgtggcggctgcagttgaagaactgaaagcgctatccaaagattgctcaacc
agcactgaaatcgagcaagtaggcaccatctctgcgaactccgattcaagcgtgggtaaa
atcattgcggaagcaatggaaaaagtgggccgtgacggtgttatcacggtagaagaaggt
caagcactgcacgatgagctagacgttgttgaaggtatgcagtttgaccgtggttaccta
tcaccatacttcatcaacaatcaagagtctggcagcgttgaactagagagcccattcatc
ctattggttgataagaagatctctaacattcgcgaacttctaccagcacttgaagcggta
gcaaaagcctctcgtccactgctgatcatcgcagaagatgtggaaggtgaagcgctcgct
acactggttgtgaacaacatgcgcggcatcgtgaaagtggcggcggtgaaagcgcctggc
tttggtgatcgtcgtaaagctatgctacaagacattgctatcctaacaggtggtacggtg
atttctgaagaagtgggtcttgagcttgaaaaagcaactctagaagatctaggtcaggcg
aagcgtgtttctatcaccaaagaaaacaccaccatcattgatggcgtgggtgaagaagcg
atgattcaaggccgtgttgctcaaattcgtcagcaaatcgaagatgcaacgtcagattac
gacaaagagaaactgcaagagcgtgtggctaaactggctggcggcgttgccgttatcaaa
gttggcgctgcgactgaagttgagatgaaagagaagaaagaccgcgtagaagatgcacta
cacgcaactcgcgcagcggttgaagaaggtattgttgctggtggtggtgttgccctcatc
cgtgcggcttctaagattgtagacctacaaggcgacaacgaagagcaaaacgtcggtatc
cgtgtagcactgcgtgctatggaagcgccacttcgtcaaattaccaagaatgcgggcgat
gaagagtccgtggttgcgaacaatgttcgcgctggtgaaggttcatacggctacaacgca
gcaacgggtgtatacggcgatatgctagagatgggtatcctagacccaacaaaagtaacg
cgctctgcgctgcagtttgcggcatcggttgctggcctaatgatcaccactgaagcaatg
gtgactgacctaccacagaaagactctggtatgccagatatgggtggtatgggcggtatg
ggtggcatgggcatgatgtaa
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