Vibrio vulnificus YJ016: VV3145
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Entry
VV3145 CDS
T00150
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K05787
DNA-binding protein HU-alpha
Organism
vvy
Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VV3145
03036 Chromosome and associated proteins [BR:
vvy03036
]
VV3145
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV3145
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VV3145
Chromosome and associated proteins [BR:
vvy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VV3145
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VV3145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
BAC95909
UniProt:
Q7MGT2
LinkDB
All DBs
Position
I:complement(3229355..3229660)
Genome browser
AA seq
101 aa
AA seq
DB search
MNSITYEKGNLMNKTQLIDFIAEKADLSKAQAKAALEATLNGVTDALKEGDQVQLIGFGT
FKVNHRAARTGRNPKTGDEIQIAAANVPAFVAGKALKESVN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgataacctatgagaagggaaacctaatgaacaagacccaattaatcgacttt
atcgcagagaaagcagacctatctaaagcacaagcgaaagctgctcttgaagctactctt
aacggtgtgactgacgcactaaaagagggtgaccaggttcaactaattggttttggtaca
ttcaaagtaaaccaccgcgcagcacgtactggccgtaaccctaaaacaggtgatgagatc
caaatcgctgcagcaaacgttcctgcattcgtagcaggtaaagcactgaaagaatcagta
aactaa
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