Vibrio vulnificus YJ016: VV3207
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Entry
VV3207 CDS
T00150
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy00730
Thiamine metabolism
vvy01100
Metabolic pathways
vvy01240
Biosynthesis of cofactors
Module
vvy_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VV3207
Enzymes [BR:
vvy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VV3207
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAC95971
UniProt:
Q7MGM3
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All DBs
Position
I:complement(3294170..3296113)
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AA seq
647 aa
AA seq
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MSNRKQARLEAKQFIDTLSVQPYPNSTKVYVEGSRSDIRVPMREISLADSLVGGTKEAPI
FQPNEAVRVYDTSGVYTDPTHQIDLYNGLPKLREEWIAERADTEVLDDVSSVYTKERLED
ETLDELRYGNLPRIRRAKAGYCVTQLHYARKGIITPEMEYIALRENMGRAKYQDEVLTQQ
HAGQSFGANLPKEITPEFVRREVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLTWEVMRDTLIEQAEQGVDYFTIHAGLLLRYIPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTKIAW
EYDVQVIIEGPGHVPMHMIKENMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQVRDNALSKAR
FEFRWQDQFNLSLDPDTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKGQ
QGEAGQAIEVKLLDDPLEGMKQKSAEFKASGSELYHPAVSHEEVAEG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgcaagcaagcgagactggaagctaaacaattcatcgatacactctctgtg
cagccgtatcccaattccaccaaagtgtatgttgagggctctcgctcagacattagagtg
ccaatgcgcgaaatctccttggcagacagcttagttggcgggacgaaagaggcaccgatc
tttcagccaaacgaagcggtaagagtgtatgacacctcgggtgtctacacggatccgacc
catcaaatcgatctctataatggccttcctaagttaagagaagagtggattgcagagcgt
gctgataccgaagtccttgatgatgtcagctcggtctacacgaaagagcgcttagaagat
gaaacgctggacgagttgagatatggcaatctgcctcgcatccgtcgtgccaaagctggg
tattgtgtcactcagttgcattatgcgcgtaagggaatcatcaccccggagatggaatac
atcgctttgcgcgagaatatggggcgcgccaaatatcaagatgaagttttgactcagcag
cacgcagggcaaagctttggtgcgaatctacctaaggaaattaccccagaatttgtacgt
cgtgaagtggcggaaggtcgcgcgatcattccttccaacattaatcacccagaatccgag
ccgatgatcatcggccgcaacttccttgtgaaagttaacgccaacattggtaactcatcg
gtgacctcgtcgattgaagaagaagtggagaagttggtgtggtcgactcgttggggcggt
gatacggtgatggatctgtcgacggggagaaacattcacgaaactcgcgaatggattcta
cgcaacagcccagttccgattggaaccgtgcctatgtatcaagcactagagaaggtcaat
ggcgttgctgagaacctaacgtgggaagtgatgcgtgatacgttgatcgagcaggctgag
cagggggtggactacttcacgattcatgctggtttgctgctgcggtatatcccaatgacg
gcgaaacgcgtgacgggcattgtctcgcgtgggggttcgatcatcgctaagtggtgtttg
gcacatcatcaagagagtttcctctatacccatttccgcgagatctgtgagatttgtgcg
aagtacgatgtagcgctctcattaggtgatggtttgcgtcctggctcgattgccgatgcc
aatgatgaagcgcagtttgccgagctcagaacattgggtgaactgaccaaaatcgcgtgg
gaatacgatgtccaagtgattattgaaggtcctgggcatgtaccgatgcacatgattaaa
gagaacatggatgagcagctcaagcattgtcatgaggcaccattctataccttgggtcca
ctgaccaccgacattgcccctggctatgaccacattacttctgggattggtgcagccatg
attggttggtatggctgtgccatgctttgctacgtaacgccaaaagaacacttaggtcta
cccaataaagaagacgtgaaaaccggcttgataacctacaaactggctgcacacgctgcg
gatttagctaaagggcatccgggtgcacaagtacgtgacaatgccttgtcaaaagcacgc
tttgaattccgctggcaagatcagttcaatctctctcttgaccccgatacggcgcgagca
ttccacgatgaaaccttacctcaggaatcaggcaaggtggcacacttttgttcgatgtgt
ggtccaaaattctgctcgatgaagatttcgcaagaggttcgtgagtacgctaaagggcaa
caaggtgaggcaggacaggcgatagaagtgaagctgttggatgacccattggaaggaatg
aagcaaaagtccgcggaattcaaagcgtcgggttcggagctgtaccatcctgcagtgagt
cacgaagaagtggcagagggttaa
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