Vibrio vulnificus YJ016: VVA0035
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Entry
VVA0035 CDS
T00150
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VVA0035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvy03000
]
VVA0035
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VVA0035
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
VVA0035
Transcription factors [BR:
vvy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
VVA0035
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VVA0035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HTH_23
Sigma70_r4
HTH_28
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BAC96062
UniProt:
Q7MGD3
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All DBs
Position
II:32684..34129
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AA seq
481 aa
AA seq
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MIEVEQGCGSPISPSNKDFSMAILNYSSLSTEQCQQARMARDSRFDGLFYVAVKSTGIFC
RPVCPANLPKEENVEYYHDKAQALSAGYRPCLRCRPDSAPDSWAWKGVETTFQRALTLIE
QGALQTETLSALAQRLGVSDRYIRQLFRRYLGISPKQYAQSQQLLFAKQLLHGSSLSVTE
IGFASGFNSTRRFNDAFQKSMGMPPSKIRRSKEVSSHDQSHIVLAFRGDLNVKHMLDFYR
QRAIESEEVVTETSYQRQVVINGKTVGFRAEFPATFPAEKRQLVVYFSMDDLTLLRPMVA
GIRRMFDLDCDTRVIEAHLNTVALGLVKSVGIRIPGVWNVWEAGVRAILGQQVSVKAAIG
QLNLLVATLHHDSEVRTFPSPQQVVDADLHFLRMPQSRKETLRRFAVMMLENEHADPNQW
LALKGIGPWTVSYAQLRGLSQPDRLLEKDLVVKKALAQFPTLNQESASPWGSYATFHLWN
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggtggaacagggctgcggttcccccatttccccgtcaaacaaggatttttct
atggccattttaaactactcatcgctctcgacagagcagtgtcaacaagcaaggatggcc
cgagatagtcgctttgatgggctgttttatgtggcggtcaaaagcactgggattttctgc
cggcctgtatgtcctgccaatttacccaaagaagaaaacgtggagtattaccacgataaa
gcgcaagccttgtcggctggctaccgcccatgtttgcgttgtcgccccgacagcgcgcct
gattcttgggcgtggaaaggggtcgaaaccacatttcaacgtgcgttgaccttgattgaa
caaggggcgctacaaacggagacattgtcagctttggcgcaacgtttaggagtgagtgat
cgctatattcgtcaattatttcgccggtatttggggatctctccgaagcaatatgctcag
tctcagcagttgttgtttgccaaacagttgttgcatggtagctcattgagcgttaccgaa
attggctttgcttccggctttaacagtactcgccgttttaatgatgcgtttcaaaagtcg
atgggtatgcccccttcgaaaatccgtcgaagtaaagaagtttcgagtcacgatcagtcg
catattgtgctcgcgtttcgcggtgatttgaacgtaaaacacatgctggatttttatcgg
cagcgagcgattgaaagcgaagaggtggtgacggagacgagttatcaacgccaagtcgtg
atcaacggaaaaacggttgggtttcgcgcggaatttcccgcaacatttccagcagagaag
cggcaattagtggtgtatttttcgatggatgatctgacgttgttgcgtccgatggtggct
ggaataaggcggatgttcgatctcgattgcgacacgcgcgtgattgaagcgcatctcaac
actgtagcgcttgggttggtcaaaagcgttggtatccggattccgggcgtctggaatgtt
tgggaagcgggcgtacgagcgatcttgggccaacaagtctcggtcaaagccgccatcgga
caactgaatctattggtcgcgactttacaccacgattctgaagtgcgcacttttccttca
ccacaacaggtggttgatgcggatctgcatttcttacgaatgccacaaagtcgaaaagaa
accttaagacgctttgctgtcatgatgctggagaatgaacatgccgatcccaatcaatgg
ttggcgttaaaaggtattggaccgtggacggtcagttacgcccaattgcgagggctttcg
cagccagacagactgcttgagaaggatttagtggtgaaaaaagcactggctcagttcccc
actttgaatcaagaaagcgcttcaccttgggggagttacgcaacttttcatctatggaat
caataa
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