Vibrio vulnificus YJ016: VVA0382
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Entry
VVA0382 CDS
T00150
Name
(GenBank) DNA-binding HTH domain-containing protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VVA0382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvy03000
]
VVA0382
Transcription factors [BR:
vvy03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VVA0382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_40
HTH_30
HTH_23
HTH_38
Motif
Other DBs
NCBI-ProteinID:
BAC96408
UniProt:
Q7MFD8
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Position
II:449333..450007
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AA seq
224 aa
AA seq
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MRSMESQNKEVILITEDSLQSSLLKEILEKKLNMVVHLLTPKELDERTTSYSSIKAILVD
YSVVEEDFYSSYLNFIDENFSEVQEVLINCQNDISIEELCIWRSLTGIFYLSDDISTLEL
GIDKILSGDMWFSRKISQEFISTLRQHSKPISKTVSTKLTKREQQIITLLSLGNSNQQIA
RKLFVRENTVKTHLHNIFKKIDVKNRVQALIWAKEHLSPTSSTI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtgaggagcatggagagtcaaaacaaggaagtgatattgattacggaagacagtctgcaa
tcctcactgctaaaagaaattcttgagaaaaaactcaatatggtcgttcatctactcact
ccaaaagagttagatgaacgaacgacgagttattcttcgatcaaggcaattcttgtcgat
tatagtgttgttgaagaggatttttattcttcatatttgaattttatagatgaaaacttt
tcagaagttcaagaggttctgattaattgccaaaatgacataagtattgaagaattatgt
atttggcgttcgttgactggaatattttatttatctgatgatattagtactttagaacta
ggaattgacaagatcctgtcgggtgatatgtggtttagtcgtaaaatatcacaagaattt
atttcaactttgcgtcaacacagtaaacctatctcaaaaaccgtatctacaaagctgacg
aaacgagagcagcaaataataaccctcttatcactggggaattcaaatcaacaaattgca
cgaaagctttttgttagagaaaacacagtgaaaacacatttacacaacatctttaaaaag
attgatgtcaaaaatagagttcaggctctaatttgggctaaggaacatctttctcccaca
tcctctacgatctaa
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