Vibrio vulnificus YJ016: VVA0646
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Entry
VVA0646 CDS
T00150
Name
(GenBank) DNA and RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vvy
Vibrio vulnificus YJ016
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvy03009
]
VVA0646
Enzymes [BR:
vvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VVA0646
Ribosome biogenesis [BR:
vvy03009
]
Prokaryotic type
rRNA helicases
VVA0646
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
Helicase_C_2
AAA_30
AAA_22
PRAI
Motif
Other DBs
NCBI-ProteinID:
BAC96671
UniProt:
Q7MEM5
LinkDB
All DBs
Position
II:complement(720329..721708)
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AA seq
459 aa
AA seq
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MTAPFNTLSLKPELLSTLDSLGYTEMTPIQAQSLPLVLDGKDVIGQGKTGSGKTATFALG
LLSNLNVSRFRVQSLVLCPTRELADQVATEIRTLARGIHNIKVLTLCGGMPMGPQILSLE
HGAHILVGTPGRILDHLSKGRIDLAELNTLVLDEADRMLEMGFQDAIDAIIDAAPTQRQT
LLFSATFPEQIETIASKVMQNPEMVKVESTHQKSTIEQRFYQLESTEERDNALEALLLTH
RPESTVVFCNTKKEVQNVTDELNHRRFSVIELHGDMEQRERERALTMFANKSISILVATD
VAARGLDVDNLDAVINFELSRDPEVHVHRIGRTGRAGAKGIAISFFSEKELYRVERIEEY
MGIDVHPAKLPQPENPKPYYPSMRTIQILGGKKQKVRAGDILGSLTKEAGIDGKLIGKIN
ILPMVSYVAIDNSVAKIAEQQLQNGKMKGRNFKARIMKG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcaccatttaacactctttctctcaagcctgaactgctatcgactcttgatagc
ttgggctatacagagatgacgccaattcaagctcagagcctaccattggtgctcgatgga
aaggatgtgattggtcaaggaaaaacaggttcagggaaaaccgccacctttgctttgggt
ctgctgagcaacctgaatgtctcgcgctttcgcgttcaatcgcttgttctttgccctaca
cgtgaattggcggatcaagtcgcaacggaaattcgtactttggctcgtggcattcacaac
attaaagtgctgactttgtgtggtggcatgcctatggggccacaaattctttcgttggaa
catggtgcacacatcttagttggcacaccggggcgcattctcgatcacttaagcaaaggc
cgtattgatcttgcagaactgaatacgttagtgcttgatgaagccgacagaatgttggaa
atgggcttccaagatgcgattgatgccatcattgacgccgcaccgactcaacgccagacg
ttacttttcagtgcgaccttcccagagcagattgaaaccatcgcaagcaaagtgatgcag
aatccggagatggtgaaagtagagtctacacaccaaaagagcaccatcgaacaacgcttt
tatcagctcgagagcaccgaagaacgtgacaacgctttggaagctctgctgcttacgcac
agacctgaatctaccgtggtcttttgcaataccaagaaagaagtgcaaaacgtcaccgac
gagctgaaccatcgtcgcttcagcgttatcgaactgcacggtgacatggaacagcgtgaa
cgtgaacgcgcgttaaccatgtttgccaacaaaagcatttctattttggtcgcaactgac
gttgccgctcgtggtttagacgtggataacctagacgccgtgattaactttgagctttct
cgtgaccctgaagtgcatgttcaccgcattggtcgtactggccgcgcgggtgcgaaaggg
attgcgatcagcttcttcagtgagaaagagctgtatcgagtagagcgtattgaagaatac
atgggtattgatgtgcatccggccaaactgcctcaaccggaaaaccctaaaccttactac
ccttcaatgcgtacgattcaaattttgggtggcaaaaagcaaaaagtccgtgctggcgat
atcttaggcagcctaaccaaagaagccggaattgatggtaagttgattggtaaaatcaat
atcttacctatggtctcctatgttgctatcgataactctgtggccaaaatcgccgaacag
caactgcaaaacggcaaaatgaaagggcgtaactttaaagcccgaattatgaaaggttaa
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