Vibrio vulnificus YJ016: VVA0693
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Entry
VVA0693 CDS
T00150
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy00260
Glycine, serine and threonine metabolism
vvy00460
Cyanoamino acid metabolism
vvy00630
Glyoxylate and dicarboxylate metabolism
vvy00670
One carbon pool by folate
vvy00680
Methane metabolism
vvy01100
Metabolic pathways
vvy01110
Biosynthesis of secondary metabolites
vvy01120
Microbial metabolism in diverse environments
vvy01200
Carbon metabolism
vvy01230
Biosynthesis of amino acids
vvy01240
Biosynthesis of cofactors
vvy04981
Folate transport and metabolism
Module
vvy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VVA0693
09102 Energy metabolism
00680 Methane metabolism
VVA0693
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VVA0693
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VVA0693
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VVA0693
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VVA0693
Enzymes [BR:
vvy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VVA0693
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BAC96719
UniProt:
Q7MEH7
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Position
II:complement(785122..786438)
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AA seq
438 aa
AA seq
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MIERLSTMNSHYQNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAV
MQAQGTCLTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANG
AVKLALLQPGDTIMGMSLDAGGHLTHGARPALSGKWFNAVQYGVDKETLEINYDDVRALA
VEHKPKMIIAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHV
VTTTTHKTLRGPRGGMILTNHEEIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEF
KTYIDSVINNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITC
NKNGIPFDTEKPMITSGVRLGTPAGTSRGFGAEEFKLIGHWIGDVLDGLVENPEGNAEVE
QRVRKEVKALCSRFPLYQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaggttatctaccatgaatagtcattaccaaaatcacagcttggaaaacttt
ttctcgactaacttgtctgcaacggatgatgccgtttttgctggtattcaagccgaattt
actcgtcaaaatgaacaaatcgaattgatcgcttctgagaacatcgtgtcgaaagcggtc
atgcaagcgcaaggcacctgcctcaccaataaatatgcagaaggttacccaggccgtcgt
tactacggtggttgtgaacacgttgataccgtggaagccatcgctatcgaacgcgcgaaa
aaactttttaattgcgaatacgcaaacgttcaaccgcactctggcgctcaagccaacggc
gcggtgaaactggcgctattgcaacctggcgacaccattatgggcatgtcgctcgatgca
ggtggccacttaactcacggtgcgcgccctgctctttcgggcaaatggtttaacgccgtt
caatacggtgttgataaagagacgctcgaaatcaactacgatgatgttcgcgcactggcg
gtagaacacaaaccaaaaatgattattgctggtggtagcgcgattcctcgcgtgattgat
tttgccaagttccgtgaaatcgctgacgaagttggcgcgattttaatggttgatatggcg
cacatcgcgggtttgatcgctacaggcgcacaccctagcccactgcctcatgcacacgtg
gtgaccaccaccacacacaaaacgctacgcggaccacgcggcggcatgatcctcaccaat
cacgaagaaatcattaagaaaatcaactctgcggtattccctggcctacaaggcggcccg
ctgatgcacgtgattgcagcgaaagcggtggcgtttggcgaagcactcggccctgagttc
aaaacttatatcgattcggtgatcaataacgcaaaagttcttgctgaagtgttgcaaact
cgcggttgtgacattgtgactggcggaacggacacgcacctaatgctggttgatcttcgt
cctaagggattgaaaggcaacaaagcagaagaggcactagagcgtgcggggatcacatgt
aacaaaaatggcatcccattcgacacagaaaaacctatgattacatcgggtgttcgtttg
ggcacgccagcgggtacaagccgaggctttggcgcagaagaattcaaattaataggtcac
tggattggtgatgttctcgacgggttagttgaaaaccctgagggcaacgcggaagtagaa
caacgcgtgcgtaaagaagtaaaagcactctgttcacgcttcccactttaccagtaa
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