Vibrio vulnificus YJ016: VVA0770
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Entry
VVA0770 CDS
T00150
Name
(GenBank) GGDEF family protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VVA0770
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VVA0770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
B_lactamase-like_C
Ribosomal_L5e
Gluconate_2-dh3
Motif
Other DBs
NCBI-ProteinID:
BAC96796
UniProt:
Q7MEA0
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All DBs
Position
II:complement(866303..868285)
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AA seq
660 aa
AA seq
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MFAVIIILKHELKAHSNKDVCSMAKYRTLDYEIPEAMQESWQRIVNLLAYIVDVPAALIM
RIQPEHIEVFSSSQSSLNPYHQGDSESLGHGLYCETVIEDNTELLVPNALNDKEWDHNPD
IKLGMIAYCGLPLLWPNGEVFGTICMLDDKENNFGQTYRELLAGFQTSIEAQLSVVYQHQ
KLLRLNEQLKQRVDKRTTNLAQLSFSLNQEIDRRKAAEQQAHYQKHHDHGTGFLNRSALE
QHLQRMLDEWRLGDSSLVVIHIGFTNARSIQTKYGFALLDDLLKIYRNQIGVIESVDSIT
GRPSSHDLVIAIRADDVTDILDNLLNRIINAGQRGFKVGESEAHLHAFIGLAVADSTTES
AQQLLRHANQAMVLSKDSGQQYAYFSATHADALLHHNQIESYLLQAVRNDDLTLYFQPKV
CPQTHKWIGAEALLRWSHPVLGDISNEALIHMAEQNGLIFEVGAFVLRSAIEKAKEWSAI
VEHFRVAVNVSAIQLKNPLFAEQVQELLIAYQLPAQYLELEVTESGLISDEVVARATLER
LHEFGVTLSLDDFGTGYASFSYLKKYPFDAIKIDKSFVQHIDKSEEDKEIIRSIIHVAKK
LDLEVVMEGIESDLQEDFLIREGCDIGQGFLYGKPMPGSEFVQGLYSQNFLGTPRFAYHT
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgtcattataattttaaaacatgagctcaaagctcattcaaacaaggatgtt
tgctcaatggcaaaatacagaacgttggattatgagattccagaagcaatgcaagaaagt
tggcagagaattgtcaacctattggcgtatatcgttgatgtccccgccgcattgattatg
cgtatccaacccgaacacattgaggtgttttcctccagtcaaagttcattaaacccttat
catcaaggagatagcgaatcgctaggccatggtctttactgcgaaaccgtgattgaagac
aacacggaattgctggtgcctaacgctctaaacgacaaggagtgggatcacaatcccgat
attaaattgggaatgatcgcctactgcggtttgcccttgctttggccaaatggtgaggtg
tttggcaccatttgtatgctcgatgacaaagaaaacaactttggccaaacatatcgagaa
ttgctcgctggttttcaaacttcgatagaagcgcaactgtctgtggtctaccaacatcaa
aaattactgcgcctcaacgaacagctaaaacaacgagttgataagcgtacaaccaatctt
gctcaacttagttttagcttaaaccaagaaattgaccgtagaaaagccgcagaacagcaa
gcgcactatcagaaacatcatgaccacggtacaggctttctgaatcgaagcgctttagag
cagcatttacagaggatgttagacgaatggcgtcttggggattccagtttggtagtgatc
catatcggattcaccaatgcccgttcaattcaaacaaaatatggttttgccctattggat
gatttgctgaaaatctaccgtaaccaaatcggcgtcattgaatcagtcgattctattact
ggccgcccaagctcgcacgatcttgtgatcgcgattcgtgcggatgacgttactgatatc
ctcgacaacctgcttaaccggatcatcaatgccggacaacgaggctttaaagtgggcgaa
agcgaagcgcatttgcacgcattcattggtttagcggtggcggattcaacaaccgaaagt
gctcaacaactgttaaggcatgccaatcaggccatggttttgagcaaagattccggccag
caatacgcgtatttttcggcaactcacgcagatgccttacttcaccacaatcaaatcgaa
agctacttactgcaagcagtaagaaacgacgatttaacgctctattttcagccgaaagtt
tgccctcaaacgcataagtggatcggcgcagaggcgttgttacgttggagccaccctgtt
ttgggggacatttccaatgaagccctgattcatatggcagagcagaacgggctgatcttt
gaagtcggtgcgtttgtactacgctctgcgatcgaaaaagcaaaagagtggtcagcgatt
gtggaacattttcgagtagcggtgaatgtgagtgcgattcaacttaaaaatcccctcttt
gctgagcaagttcaggaattgctcatcgcctaccaacttccggctcaatatcttgaactt
gaggtaacagaaagcggtttgatcagtgatgaagtggttgcacgtgctaccttagaacgg
ttgcatgaattcggagtgacattgtcacttgatgactttggtactggctacgcctctttc
agttatttgaaaaagtatccattcgatgcgataaaaattgataagagttttgttcaacat
attgataagtcggaagaagacaaagagatcatccgttcaattatccatgtggctaaaaag
ctcgatttagaggtggtgatggaaggcatcgaatccgacctacaagaggatttcttgatc
cgcgaaggatgcgatattggccaaggatttctgtatggcaagccaatgcctggtagtgaa
tttgttcaaggcttatacagtcagaactttttaggcacccctcgcttcgcgtatcacaca
taa
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