Vibrio vulnificus YJ016: VVA1080
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Entry
VVA1080 CDS
T00150
Name
(GenBank) deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy00240
Pyrimidine metabolism
vvy01100
Metabolic pathways
vvy01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VVA1080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vvy02044
]
VVA1080
Enzymes [BR:
vvy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
VVA1080
Secretion system [BR:
vvy02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
VVA1080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
BAC97106
UniProt:
Q7MDF6
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All DBs
Position
II:1208502..1208960
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AA seq
152 aa
AA seq
DB search
MISKWAKRFYQMAELVASWSKDPSTQVGAVITKQNRIVSVGFNGYPHGVSDSVDTDEREL
KYLKTLHAEENAILFSKRDLDGCEIWVTHFPCPNCAAKIIQTGISRVHCPEQSEDFLSRW
GDKIAVSQDMFNQAGVEVNWLPVDELGEDGVR
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaaatgggcaaaacgcttctatcaaatggcagaattagtcgcctcttggagt
aaagatccatccactcaagtgggtgcggtgatcaccaaacagaaccgtatcgtttctgtt
ggctttaacggatatccacacggtgtttccgatagcgtcgacaccgacgagcgtgaattg
aaatacctcaaaacactgcacgccgaagaaaacgccattctgttttctaagcgtgatttg
gacggatgtgaaatttgggtcactcactttccttgcccaaattgtgctgcaaagattatt
caaacgggcatttcgcgcgtgcactgccctgagcaatcggaagattttctttcccgttgg
ggtgacaaaattgccgtaagccaagatatgttcaatcaagcaggtgtcgaagtaaattgg
cttcctgtcgatgaactaggcgaagacggcgtacgttga
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