Vibrio vulnificus YJ016: VVA1405
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Entry
VVA1405 CDS
T00150
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03030
DNA replication
vvy03430
Mismatch repair
vvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VVA1405
03430 Mismatch repair
VVA1405
03440 Homologous recombination
VVA1405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VVA1405
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VVA1405
Enzymes [BR:
vvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VVA1405
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VVA1405
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VVA1405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAC97431
UniProt:
Q7MCI1
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All DBs
Position
II:1556404..1557123
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AA seq
239 aa
AA seq
DB search
MMIKKWFKRWDTMPSQEQIRQQIVVESAWPEALQNYLNTPLIAQETPLHQVSFLALDFET
TGLDAKHDKILSIGMVDLTLEGINLSSAEEILLNHGAYIKAESARINGLTPQALEQGCSL
EQGMMRLFERAQGKVLLAHSAIIEQGFLQAFAQQHFQLAKLPCHFVDTLQIEKRFSYAGK
SGQRSSFQLDDLRRCYHLPDYHSHSAASDALACAELFIVQSKKLDLNKQRQLNTVLCSI
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaagaaatggttcaagcgctgggacaccatgcccagccaagaacagatacgc
cagcagatcgtcgttgaatcggcgtggcccgaagcgctgcaaaactacctgaatacgccg
ctcattgcacaagagacgccacttcatcaggtctcgtttcttgctttggattttgaaacc
actgggcttgacgcaaagcacgataaaatactgtccatcggtatggtggatttgacgctc
gaaggcattaacctctcaagcgcagaagagatcttgctcaaccatggcgcgtacattaaa
gccgaatccgcgcgcattaatggcctaacgccgcaggcgctggagcaaggttgctcgcta
gagcaagggatgatgcgtttatttgaacgtgcacaaggcaaagttctgctcgcgcacagc
gcaatcattgaacaaggttttctccaagcctttgctcaacaacattttcagcttgccaaa
ttgccttgccacttcgtggatacactgcaaattgaaaagcgctttagctacgcagggaaa
agcggccaacgcagcagttttcaacttgatgatttacgacgttgttatcacttacccgat
taccattctcattctgccgccagtgatgccttggcctgtgcggagttgtttatcgtgcaa
agcaaaaaactcgatctgaataaacaacggcagttaaacacggttttgtgctccatataa
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