Vibrio ziniensis: G5S32_00420
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Entry
G5S32_00420 CDS
T07449
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03420
Nucleotide excision repair
vzi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5S32_00420 (uvrD)
03430 Mismatch repair
G5S32_00420 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_00420 (uvrD)
Enzymes [BR:
vzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S32_00420 (uvrD)
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5S32_00420 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
G5S32_00420 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Viral_helicase1
SseB_C
Motif
Other DBs
NCBI-ProteinID:
QIH40535
UniProt:
A0A6G7CEI9
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All DBs
Position
1:88936..91110
Genome browser
AA seq
724 aa
AA seq
DB search
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLLSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSSSGMWNGTFHGICHRILRAHYLDAKLQDDFQIIDSDDQ
IRLLRRLIKAQNLDEKQWQARQVSWWINGKKDEGLRPAHIDAYRDPITQTYLQLYTAYQD
ACDRAGLVDFAEILLRTLELLRDNKHIREHYQARFKHILVDEFQDTNNIQYAWLRLMTGR
ETHVMIVGDDDQSIYGWRGAKVENIEKFTQEFPSVNTIRLEQNYRSTKTILEASNTLIAN
NSERMGKELWTDGAEGELISVYSAYNELDEARFVVGKIKAWNEDGGSLEDTAILYRNNAQ
SRVLEEALIQAGLAYRIYGGMRFFERQEIKDALSYLRLIANRNDDTAFERVVNTPTRGLG
DKTLDTIRFAARDRGCTLWDASVLLLEEKVLAGRAATSLGRFIELVNALEDDSAEMSLHE
QTDHVIKTSGLFEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAEEMTLLTAFLTHAA
LESGEGQADEFDDAVQLMTLHSAKGLEFPMVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMKKLYITYAEMRRLYGQDKYHKPSRFIRELPDKCLDEVRMKAQVSRPASSGRF
SQTVVKESFNETGFTLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAK
LERV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccttctcttttactcgatggtttaaacgacaaacaacgcgaagcagttgct
gcgccactagaaaacctgctggtgctagcgggtgcgggcagtggtaaaacgcgagttctc
gttcaccgtatcgcatggttattatcggtagagcaggcatcaccgttctcaattatgtcg
gtgacctttactaataaagctgccgcagaaatgcggggtcgaattgaagaactgatgatg
ggcagttcctctgggatgtggaatggtacgttccacggaatttgtcatcgtattctgcgt
gcacactatctggatgcgaaactgcaagatgatttccaaattattgattctgatgatcaa
attcgtctgttgcgccgcctaattaaagcgcagaacttggatgagaagcagtggcaagcg
cgtcaggtatcgtggtggattaacggtaagaaagacgaaggcttgcgtccggctcatatt
gatgcctatcgagatcctatcactcagacttatcttcagctttataccgcctatcaggat
gcgtgtgatcgcgctggattggtcgactttgctgagatcttgctgcgaacgttagagtta
ttgcgagataacaaacatattcgtgaacactaccaagcacgtttcaaacatattttggtg
gatgaatttcaagataccaacaacattcaatacgcttggctgcgtctgatgactggtaga
gagacccacgtgatgatcgtgggtgatgatgaccagtctatctatggctggcgtggagca
aaagtagaaaacattgagaagtttacccaagagttcccaagcgtaaatactattcgtctg
gagcaaaactaccgctcaaccaagaccattcttgaagcatctaacactctgattgctaat
aacagtgagcgtatgggtaaagagctgtggactgatggtgccgaaggtgagctaatctcg
gtttactcagcctacaacgaactggatgaagcacgatttgtggttggaaaaatcaaagcg
tggaacgaagacggtggttctttggaagatacggcgattttgtaccgtaacaatgcgcag
tcacgtgtgttggaagaagcactgattcaggctggcttagcctatcgaatttacggtggc
atgcgattcttcgagcgtcaggaaatcaaagatgcattgagctacctgcgcttgattgct
aaccgtaacgacgatacggcatttgaacgcgtagtgaatacacccactcgtggcttgggt
gataaaaccttagatactattcgttttgctgcccgtgatcgcggttgcaccttatgggat
gcgagtgttctattgctagaagagaaagtactggcagggcgtgctgctacatcgcttggt
cgctttattgaactggttaacgcactagaagatgacagtgcagaaatgtctttgcatgag
caaactgaccatgtgatcaaaacctcgggtctgtttgaaatgtaccaacaagagaaaggc
gagaagtcgaaggcacgcatagagaacttggaggagctggtaacagcaactcgtcagttc
gaaaagccggaagaagcagaagagatgacattgctaacggcattcttgacccatgcggca
ttggaatctggcgaaggtcaggcagatgagttcgatgatgcggttcagttaatgacgctg
cacagtgcaaaaggcttggaattcccaatggtattcatggttggtgttgaagagggtatg
ttccctagtcagatgtcagcagaagaagctgggcgtttagaagaggagcgccgcttgtgt
tacgtgggcatgacccgtgccatgaagaagctttacatcacttacgcggagatgcgtcgt
ctgtacggacaagataagtatcataagccttctcgctttattcgcgagctgccagataaa
tgcttggatgaagtgcgaatgaaagcgcaggtgagccgtccggcaagtagcggtcgtttc
agtcaaaccgttgtcaaagagagctttaatgagacgggctttacgctaggctctcgtgtg
cgtcacccgaaatttggagaaggcaccatcatcaactttgaaggcagtggtccacaaagc
cgcgttcaggttgcgtttaacggtgaaggcatcaaatggttggttactgcatacgccaag
ctggaacgagtgtaa
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integrated database retrieval system
