Vibrio ziniensis: G5S32_00500
Help
Entry
G5S32_00500 CDS
T07449
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vzi
Vibrio ziniensis
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vzi03021
]
G5S32_00500 (rpoH)
Transcription machinery [BR:
vzi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5S32_00500 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
UCR_14kD
VpsR
Motif
Other DBs
NCBI-ProteinID:
QIH40549
UniProt:
A0A6G7CEN9
LinkDB
All DBs
Position
1:109670..110527
Genome browser
AA seq
285 aa
AA seq
DB search
MTTSTYQLALVSQDSLDSYIRTANSYPMLTAEEERELAEKLHYEGDIEAAKGLILSHLRF
VVHVARGYSGYGLPLADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAQDA
TFEFSADDEDNSNSYAAPMLYLEDKNSDLADNLEEQNWENHTTQRLSFALASLDERSQHI
VRSRWLDDQKSTLQELADMYEVSAERIRQLEKNAMKKLKEAVGEL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactacttcaacatatcaattagcacttgtttcgcaagacagcttagatagttatatc
cgcacagcgaacagttatcctatgctgaccgcagaggaagaacgtgagcttgctgagaag
ttgcattatgaaggtgatatcgaagctgcgaaaggcttgattttgtcacatcttcgtttc
gttgttcacgttgctcgtggttattctggctacggcttgccattagcggatctcgttcaa
gaaggtaacattggtctgatgaaagcggtaaaacgctttaacccggaagtgggtgtaaga
cttgtgtcttttgctgttcactggatcaaagcggaaatccacgagtacgtattacgtaac
tggcgtatcgtgaaaattgcgaccacaaaagcgcagcgcaaacttttcttcaatctacgt
aaatcgaaaaagcgtttaggttggtttaacaacggtgaagttgaaacggtagctcgtgag
ttaggtgtagagccttcagaagttcgtgagatggaatctcgtctagcggcacaagatgct
acatttgagttttctgctgacgatgaagacaacagtaactcttatgcagcgccaatgctt
tatcttgaagacaagaattcagatttagcggacaacctcgaagagcaaaactgggaaaac
cacactactcaacgtttgagctttgcgcttgctagccttgatgagcgtagtcagcatatt
gtacgctcgcgttggttggatgaccaaaaatcgacgctacaagaattagccgatatgtat
gaagtgtctgcagagcgaattcgtcagttagaaaagaacgcaatgaagaaattgaaagaa
gcggtaggcgagttgtaa
DBGET
integrated database retrieval system
