Vibrio ziniensis: G5S32_00960
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Entry
G5S32_00960 CDS
T07449
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5S32_00960 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_00960 (priA)
Enzymes [BR:
vzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S32_00960 (priA)
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S32_00960 (priA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
AAA_19
zinc-ribbons_6
AAA_22
TrwB_AAD_bind
cobW
DUF1258
Motif
Other DBs
NCBI-ProteinID:
QIH40629
UniProt:
A0A6G7CEW6
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All DBs
Position
1:215900..218101
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AA seq
733 aa
AA seq
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MRPTIARVALPVPLDKQFDYLIPSHLFPIIGGRVSVPFGRQTLVGIVTEFAQESEFSIEQ
LKSVKEVLDSQPVWPDKLYSLLKWCSQFYQFPLGDTLANAMPSALRKGKPADFASCKEWQ
MTPSGSNQMMQGFGRAFKQAQVMNLLTSGAVSHSSLLEEDVSIATLKSLQEKGWIEVSEQ
KPQFKAWPKQIEADVEKPKLNQEQAIAIASVNSSKGFGCYLLEGVTGSGKTEVYLNLIKP
VLEQGKQALVLVPEIGLTPQTINRFKKRFNVPVEVIHSGLNDTERLNAWLSARDKVAGIV
IGTRSALLTPFADLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRANQEQIPIVLGSATPA
LETLHNALTGKYHHLHLTERAGVAVPTRNRVLDVKGLYLESGLSAPLIADMRRHLTEGNQ
VLLFLNRRGFSPALMCHECGWIADCQRCDAYYTFHQYSNEIRCHHCGSQRPVIHQCQSCG
STQLVTVGVGTEQLEKQLAELFPEYKTIRIDRDSTRRKGSLESALTSIRRGEYQILIGTQ
MLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTHH
PEHSLLQDLLQRDYHHFALTALAERKLAMLPPYTYLTLFRAEANQSQMVEDFLRQVRHTL
EAHPLFDQHCMVLGPTPAPLAKRAGKFRWQLLLQAEARSVMQKLLMSAKPAISMLPLASK
VRWTLDIEPQDLS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaacaatagctcgtgttgcactacctgtaccactagacaaacagtttgattac
ctcattcctagccatctttttccaattattggcggaagggtatcagtgccatttggccgt
caaacgctggtggggattgtgactgagtttgcgcaagagtccgaattttctatagagcag
ttaaaatcagtcaaagaagtcttagattctcaacctgtttggccggataaactgtactcg
ctgctgaaatggtgcagtcagttttatcaatttcctcttggcgatactctcgccaacgct
atgccgagtgcgctacgtaaaggtaaacctgcagactttgccagttgcaaagagtggcaa
atgacacccagtggtagtaaccaaatgatgcaaggtttcggacgcgcctttaagcaggct
caggttatgaaccttcttacttctggcgccgtttctcattcttccttgttggaagaagac
gtcagcatagcgactctcaaaagcttgcaagaaaagggatggattgaagttagtgagcag
aagccgcagttcaaagcctggccgaagcagattgaagcggatgttgaaaagccaaaatta
aaccaagaacaagccatcgcgattgcttctgtaaacagcagtaaaggcttcggttgctat
ttattggaaggggtaacaggctcaggtaaaacagaagtttatctcaacctaattaagccg
gtattagagcaagggaaacaagcattagtgctggtgcctgaaattggtttaacgcctcaa
accatcaaccgttttaaaaagcgctttaatgtgcctgtagaagtgattcactctgggctc
aatgataccgaacggctaaacgcgtggttgtcggcgcgagataaagtggcaggcattgtc
attggtactcgctcggcattgttaacgccgtttgcggatctcggtattattattgttgat
gaagagcatgacagctcttacaagcagcaggatagtctgcgttatcatgcccgtgatgtg
gcggtgatgagagctaatcaagagcaaatacctattgtgctgggttcagcgacaccagcg
ttagagacgttacataatgcgttaacgggcaaatatcatcatctacatctgacagaacgt
gccggtgttgctgtacctactcgcaaccgcgttttggatgtgaaaggtttgtatctcgaa
agtggattgtccgcgcctttaattgctgacatgcggcgtcatctgactgaaggcaaccaa
gtgttactgtttctcaatcgtcgtggcttttcacctgcattaatgtgccatgagtgtgga
tggatcgccgattgccaacgctgtgatgcctattacaccttccatcaatacagcaatgaa
attcgctgccaccattgtggttctcagcgtcctgttattcatcagtgtcagagttgcggt
tctacacaattggtgacagtaggggtagggacagaacagcttgaaaaacaattagcagag
ctattccctgaatataaaaccatacgtatcgatcgagacagcactcgcagaaagggcagc
ttagagtcggcattaacgtcgattcgtagaggtgagtatcagatcctgatcggtacccaa
atgttggctaaaggtcatcacttcccagacgttactttggtcgctctgttggatgtggat
ggctcactctacagtagtgattttagagcgtccgaacgtttagcgcagctcttcattcag
gtagcaggaagagctggacgtgcaagtaagcctggtgaagtgatattgcagactcaccac
ccagagcacagcttgctacaagatcttcttcagcgagattatcaccattttgccttgact
gctttggcggagcgtaaattggcaatgttaccaccatatacctatctgaccctgttcaga
gccgaagcgaatcagtctcagatggtggaagatttcttgcgtcaggttcgtcatacattg
gaagcgcatccgttatttgatcagcactgcatggttttaggaccaacgcctgcgccactg
gctaaacgtgctggaaagtttcgctggcaacttctattgcaggcagaggctcgctcagtg
atgcaaaaattgttgatgagcgctaagccggccatttcaatgttgccattagccagtaaa
gttcgctggacactggatattgagcctcaggatttaagttaa
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