Vibrio ziniensis: G5S32_01035
Help
Entry
G5S32_01035 CDS
T07449
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi00040
Pentose and glucuronate interconversions
vzi01100
Metabolic pathways
vzi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
G5S32_01035
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S32_01035
Enzymes [BR:
vzi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
G5S32_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
DUF4479
DUF6491
Motif
Other DBs
NCBI-ProteinID:
QIH40643
UniProt:
A0A6G7CEZ9
LinkDB
All DBs
Position
1:231126..232802
Genome browser
AA seq
558 aa
AA seq
DB search
MKKTYLAVAVMATLAGCSTSNNATSSAAATSPAEAITYDANSPSIGATGWASADGPVTGG
EGAKAENIYVVENRVQLVEALFGKKDANLKAEPSNERKIIYVKGTIDLTEGADGKSLTGA
DFIAQCPDTGFTDYDAFYDAYRKAYDPAVWNKQDLARNGRPPMVNGPLEDARSCFQKAQE
AHTVLRVGSNTSILGLGTDAQIKFGTLRLGTAGREAVTNIVIRNIEFSDAFDFFPQWSPT
DSFSIDKKELGQGNCSDKFVSDTVNPYGCASAGGGGRWNSEYDLIAVDNAQRVWIDHNTF
SDGERTDDKFPPVWAAPYNIKEQKVQHHDGLVDITNAATKVTLSYNIFKDHDKTNLLGGS
DSSNAKKGYGPGAIDVTFNHNIWDNTGQRMPRIRFGRVHSYNNYFNLNATKDKEAGKYGM
MDALILGTASKLYAENNVFDIKNDGEGTFEHKIVGYYSRTNNEQKCIKTGDFDEASCGTY
FYAAGNQVNGAAVDLNKTVEANQAKSSSNAKLTMLNPNDENSFWLPKKTYQYQVDSVETL
KDHLLNNAGSGKIEIIKK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacttaccttgctgttgctgtgatggcaacgttagcgggttgcagtactagc
aacaacgccacttcttctgccgctgccacatctcctgccgaagcaattacttatgatgca
aacagcccttctattggtgcaacaggttgggcatccgctgatggtccagtgactggcggt
gaaggcgctaaagctgaaaatatttatgtggtagaaaaccgcgttcaattagttgaagcg
ctttttggtaaaaaagatgcgaacttaaaagctgaaccaagcaacgaacgcaaaattatt
tatgtaaaaggcactatcgatttaactgaaggtgcggatggtaagtctttaactggtgct
gattttattgctcagtgtccagatacaggtttcacggattacgatgcattctatgatgct
tatcgtaaagcttatgaccctgccgtatggaacaagcaggacctagctcgcaacggtcgc
ccaccgatggtaaatggtccactagaagatgcacgtagttgtttccaaaaagcgcaagaa
gcacacactgtactacgtgttggttctaacacttccattctgggtctgggtaccgatgca
caaatcaaatttggtacattgcgtctaggtactgcaggtcgtgaggcagtaacaaacatt
gttatccgtaatattgaatttagcgatgcatttgatttcttcccacaatggagcccaact
gactcatttagcatcgataagaaagagctaggtcaaggcaactgtagcgataaatttgtt
agcgatactgtaaacccatacggttgtgcgagtgctggtggtggcggtcgttggaactct
gaatacgatttgattgcggttgataatgctcaacgtgtttggattgaccacaacacattt
agcgatggtgagcgtacagacgataagttcccaccagtatgggctgctccttacaacatc
aaagagcaaaaagttcagcaccatgatggcctagtggacattactaacgctgcaactaaa
gtaactttgtcgtacaacatctttaaagatcacgacaaaactaacctgctaggtggtagt
gattcatcaaatgcgaaaaaaggttatggccctggcgcaattgatgtgacattcaaccac
aacatttgggataacactggtcaacgcatgcctcgtatccgttttggtcgtgtacactca
tacaacaactacttcaacctgaatgcaactaaggataaagaagccggtaagtacggcatg
atggatgctcttatcctaggtaccgcttcaaaactatacgctgagaacaacgtatttgac
attaaaaacgatggtgaaggtacatttgaacataagattgttggttactactcacgtact
aacaacgagcaaaaatgtattaagaccggtgattttgatgaagcatcatgcggtacatat
ttctacgctgcaggaaaccaagttaatggcgcagcagttgatttaaataaaactgttgaa
gctaaccaagctaaatcaagcagcaacgctaaattaactatgttaaatccaaatgatgaa
aattcattctggttgccgaagaaaacttaccaatatcaagttgattcagttgaaacattg
aaagatcacctactaaataatgcaggttcaggaaaaatagaaattattaaaaaataa
DBGET
integrated database retrieval system
