KEGG   Vibrio ziniensis: G5S32_01040
Entry
G5S32_01040       CDS       T07449                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
vzi  Vibrio ziniensis
Pathway
vzi00040  Pentose and glucuronate interconversions
vzi01100  Metabolic pathways
vzi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vzi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    G5S32_01040
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    G5S32_01040
Enzymes [BR:vzi01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     G5S32_01040
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: QIH40644
UniProt: A0A6G7CEW7
LinkDB
Position
1:232988..234550
AA seq 520 aa
MSKKLLALLCASILAGCGGGGSGSGSSDNSDDVVDIGEDITGALTSLGADGWAASSLEVT
GGNDAASANQYIVTTRAELIEALYGSSDTALSKDPSNTSKIIYIQGTIDLAEGDDGQTMD
GSDFIQAANADSSANCSKYGHTDIDTFYDEYNAEYDPNGDWGKADVSGELEFARQCFQRY
QATRMVFRVGSNTSILGLGEDAEIKNGMLRLGKSSDTAVENIVIRNITFNDAFDHFPQWD
PTDSDGRWNSQYDLISVENAKGVWIDHNTFSDGERTDDQYPSVFASPYNNKEQKVQHHDG
LVDVTSGSTQITLSYNHFKNHDKTNLLGGSDTPDRDDGYGPGAIDVTFHHNYWQNVGQRL
PRVRYGRVHVYNNYYKLDVSGSTSPTYYMGDAMTLGTAAKLYVENNVYDITGSYSNSKLI
KLSSSTSNQTKCLTAGYTAAECGTYYYATENKVNGSTKNLNSIVTGQESSSSVSVTILDP
TDSSSFWLPSFSYTYETDSTDNVKELVLRSAGAGKLIEEE
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgagtaagaaattattagctttgctttgcgcaagtatactcgctggctgtggtggtggc
ggttctggctctggttcaagcgataacagtgatgatgtggttgatatcggtgaggatatt
accggtgcgctaacatcgttaggcgccgatggttgggcagcctcttctttagaagttact
ggtggtaatgatgctgcatcagctaaccagtatatcgtcacaactcgtgctgaactgata
gaagctctgtacggtagtagtgacacggctttgtccaaagatccaagcaatacgtcaaaa
atcatttatattcagggtactatcgacttggcagaaggcgatgatggccaaacgatggac
ggttcagacttcattcaagctgctaatgcagattcgagtgctaactgttcaaagtatggt
catacggatatagacactttctatgatgagtacaatgcagagtatgatccaaatggcgat
tggggtaaagcagatgtgtctggagaattggaatttgctcgccagtgcttccaaagatat
caggctactcgaatggtatttcgcgttggttcaaacacctctatcttaggtttgggtgaa
gatgcggaaataaagaatggtatgctgagactcggtaaaagtagtgataccgcggtcgaa
aatattgttatccgcaacattacttttaacgatgcgtttgatcactttccacaatgggac
ccaacagattctgatgggcgctggaactcacaatatgacttgatttcggtggaaaatgcc
aagggtgtgtggattgaccacaatactttcagtgatggtgaacgaaccgatgatcagtat
ccatcagtttttgcttctccatacaacaacaaagaacaaaaagttcagcatcatgatggc
ttagtggacgttaccagtgggtctacccagattactttgtcttacaaccattttaaaaac
cacgataaaactaatttgttaggtggtagcgatactccagatagggatgacggttatggc
cctggtgctattgacgttaccttccatcataactattggcaaaatgttggtcagcgttta
cctcgcgtgcgttacggtcgtgtacatgtgtataacaactattataagttggatgtatct
ggtagtacttcaccaacgtattacatgggtgatgctatgacacttggcactgccgctaag
ttgtatgtagaaaacaacgtgtacgatatcactggcagttattctaacagtaagcttatt
aaactaagctcaagcacgtcgaatcaaactaagtgtctaacggctggctacacagcggct
gaatgtggcacctactactatgctactgaaaacaaagttaatggttctaccaagaactta
aacagcattgttacagggcaggagtcaagtagcagtgtgtctgtgacaattctagatcca
acagattcgagcagcttctggctaccgtcattttcttatacttacgagactgacagcact
gataatgttaaagaactggtattaagaagcgctggtgcaggtaagttaatcgaagaagag
taa

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