Vibrio ziniensis: G5S32_01510
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Entry
G5S32_01510 CDS
T07449
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vzi
Vibrio ziniensis
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vzi03009
]
G5S32_01510 (dbpA)
Enzymes [BR:
vzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G5S32_01510 (dbpA)
Ribosome biogenesis [BR:
vzi03009
]
Prokaryotic type
rRNA helicases
G5S32_01510 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
Helicase_C_2
CMS1
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
QIH40737
UniProt:
A0A6G7CF60
LinkDB
All DBs
Position
1:322549..323931
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AA seq
460 aa
AA seq
DB search
MSDTSFSALNLKPELLSNLETIGFTNMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGL
GVLSNLDVKRFRVQALVLCPTRELADQVATDIRTLARAIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLDMGFQDALEAIIDQAPTKRQ
TLLFSATYPDSIQQIAQKVTHDALMIKVAATHDTSSIKQYFYKVEGSEARDDALEALLLK
HQPESSVVFCNTKREVQHVADELHHRGFSVIELHGDMEQRERDQALVQFANKSISILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFSEKEMYRVAQIDE
YMDIAIEPATLPQKPSGVAPYQASMVTIQIDGGKKQKVRAGDILGALTSDGELSAAHIGK
INLSAMRSYVAVEKGIAKKALSKLSNGKMKGRQFRARFIK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgatacttcattttcggctttaaaccttaagccagaattgctttctaaccttgaa
actatcggttttaccaacatgacaccgattcaagcacaatcgttgccagcgattcttaaa
ggacaggatgtcattggccaaggaaaaacaggatcaggcaaaactgcggcgtttggtctc
ggtgttttgtctaacttggatgtaaaacgcttccgagttcaggcattagtgctttgtcca
acgcgtgagttagctgaccaagtagcaacggatatccgcacgctggctcgcgctattcac
aatattaaagtgctgacgctttgtggcggtatgcctatgggacctcaaattggttcccta
gagcatggcgcgcatattttggttggtacgccaggacgtattcttgatcacctaagcaaa
gatcgaatcgatttgagtgagctgaatacgcttgtgctggatgaagctgaccgcatgcta
gacatgggtttccaagatgcgctagaagcgattatcgatcaagctccaacgaagcgtcag
actttgctattcagtgcgacctatcctgattcaattcagcagatcgcgcagaaagtgact
catgatgcattgatgattaaagtcgcagcgactcacgacacctcaagcatcaagcaatat
ttttacaaagttgaaggtagtgaagctcgtgatgacgcgctagaagctttactgctgaaa
catcagccggaatcgtcagtagtgttctgtaatactaaacgcgaagtacagcatgtggct
gatgagcttcatcaccgcggttttagcgtgattgaactgcacggtgacatggaacaacgt
gaacgtgaccaagctttggttcagtttgccaataagagtatctcaattctggttgcaacg
gatgtggcagctcgtggtttagatgtggataaccttgacgcagtatttaactttgagctt
tctcgtgacccagaagtacacgtgcatcgtattggccgtactggccgcgcaggaagtaaa
ggactagcgtttagcttcttcagtgagaaagagatgtaccgcgtggctcagattgatgag
tacatggacatcgctatcgaacctgcaactctgccacagaaaccttcgggagtagctcca
tatcaagcgtctatggtgacaatccagatcgatggtgggaagaagcagaaagtgcgtgcc
ggagatattttgggtgcgttgacatctgacggtgaactctctgccgctcacatcggcaaa
attaacctgtctgctatgcgttcttatgtggcggttgaaaaaggtatcgcgaaaaaagca
ttgagcaaattgtcgaatggcaaaatgaaaggacgccagttccgcgcccgtttcataaaa
taa
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