Vibrio ziniensis: G5S32_02405
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Entry
G5S32_02405 CDS
T07449
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03410
Base excision repair
vzi03430
Mismatch repair
vzi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5S32_02405 (recJ)
03430 Mismatch repair
G5S32_02405 (recJ)
03440 Homologous recombination
G5S32_02405 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_02405 (recJ)
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
G5S32_02405 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
G5S32_02405 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G5S32_02405 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QIH40901
UniProt:
A0A6G7CFI6
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All DBs
Position
1:513184..514923
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AA seq
579 aa
AA seq
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MIEIQRRPEPDLSLLPDSIPPILKRVYINRGVTDLEQLNKAAKALHSYQKLHGIEQAVEL
LFQAIHEQKRIIIVGDFDADGATSSALSVLALRMLGSRNVDYLVPNRFEDGYGLSPEVVD
QAISLGAEMIMTVDNGVSSIEGVRYAKQKGLQVLVTDHHLPGNELPEVDAMVNPNLEQCA
FPSKSLAGVGVAFYLMMALCVHMRKVGYFTEQDMQEPKLMELIDLVALGTVADVVALDEN
NRILVHQGLQRIRAGLARPGIQALIEVAKRDASKLVASDFGFALGPRINAAGRLDDMSFG
VELLLCNNIHAARRMASELDGLNQTRKDIEEGMKQEAMAFCERLEFGKDSELPYGLVLFQ
RDWHQGVIGILASRVKEQYHRPVIAFADGGDGLIKGSCRSVAGLHMRDALDKIDTQNPGI
IKKFGGHAMAAGLTIAEKDYERFCKLFDEVVRQDLDDAMLKGVILTDGELKPEEFSMHTA
ETLRAGGPWGQAFPEPIFDGEFKVLHQKLVGEKHLKLMLEPLHKGHPTNIMIDGIAFNVD
LRRWPDASVKTIRLAYKLDINEFRGNQTLQLMIDHLDAK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattcaacgcagaccagaacctgatttatctcttcttcccgattctattcca
ccaattttaaaacgtgtgtatataaaccgtggtgtcaccgatttagagcagttgaacaaa
gcagctaaagcactgcattcctaccaaaaactgcatggtatagaacaggcggttgaactg
ctatttcaagctattcatgagcaaaagcgcattattatcgtcggtgattttgatgcagat
ggagcaaccagttctgcgctctcggtgttggctctacgtatgcttggcagccgtaatgta
gattatctggtaccaaaccgttttgaagatgggtatggattaagtcctgaagtggttgat
caggcgataagcttaggcgctgagatgatcatgacggtggataacggcgtctcctcgatt
gaaggggtacgctatgcaaagcagaaaggcttgcaggtattggtaacagaccaccatttg
cctggaaatgagctgccagaagtggatgcgatggtaaaccccaaccttgagcaatgcgcc
tttccatcaaaatcattggctggcgtaggtgtcgctttttatctgatgatggcgctttgt
gttcacatgcgtaaagtgggttatttcaccgagcaagacatgcaagagcctaaattgatg
gaactgatcgatttggttgcattgggtactgttgctgacgtggtcgcgttggatgaaaac
aaccgtattcttgtgcaccaaggtttgcagagaattcgcgctggtttagccagaccgggg
attcaggcattaattgaagtcgctaagcgtgatgcgagcaaattggtggcatctgacttt
ggttttgctcttggacctcgtattaatgctgccggtcgtttggatgatatgtcttttggt
gtagagcttctgttgtgtaacaacattcatgccgctcgtcgtatggcgagtgaattagat
ggtttaaaccaaacgcgcaaagatatcgaagaagggatgaagcaagaggcgatggctttt
tgtgagcgtctagagtttggcaaagatagtgagctgccgtatggcttagtgctgttccag
agagattggcaccaaggtgttatcggtattctcgcttcccgtgttaaagaacaatatcac
cgtcctgtgatcgcttttgccgatggtggtgatggtctgattaaaggctcttgtcgctct
gttgccgggctgcacatgcgtgatgcgctggataaaattgatactcaaaatcctggcatt
attaagaaatttggtggtcatgcgatggctgctggtttgacgatcgctgagaaagactat
gagcgtttttgtaaactgtttgacgaagtggttcgtcaggatcttgatgacgccatgcta
aaaggtgtaattctgaccgatggtgaactcaaacctgaagaattttctatgcataccgct
gaaacattacgagctggtggcccatgggggcaagcatttccagagccgatttttgatggc
gagtttaaagtgttgcatcaaaaattggtgggtgaaaaacatcttaaattaatgttggag
ccactccacaaaggtcacccaaccaacatcatgatcgatggtattgccttcaatgttgat
ttgcgtcgttggcctgatgcttcagtgaaaacaatacgattagcgtacaagttggacatc
aatgagttccgtggaaatcagactttgcaactaatgattgatcatctagatgcaaaataa
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