Vibrio ziniensis: G5S32_02725
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Entry
G5S32_02725 CDS
T07449
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S32_02725 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vzi03019
]
G5S32_02725 (pnp)
03016 Transfer RNA biogenesis [BR:
vzi03016
]
G5S32_02725 (pnp)
Enzymes [BR:
vzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G5S32_02725 (pnp)
Messenger RNA biogenesis [BR:
vzi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G5S32_02725 (pnp)
Transfer RNA biogenesis [BR:
vzi03016
]
Prokaryotic type
tRNA degradation factors
G5S32_02725 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
S1_2
DUF3016
DUF5813
Motif
Other DBs
NCBI-ProteinID:
QIH40962
UniProt:
A0A6G7CFT7
LinkDB
All DBs
Position
1:597344..599476
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AA seq
710 aa
AA seq
DB search
MFEKPVVKTFQYGNHTVTLETGVIARQATSAVMVTMDDTAVFVSVVGKKEAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVMS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSEKELATSRLDLVV
AGTDSAVLMVESEADNLTEEEMLSAVVFGHDQQQTVINAINEFAAEVATPAWNWTAPAEN
TELKAKIAELAEAKLVEAYQITEKMARYDRIHEISAEVNEKLLAENEELNLKEVHTIFHD
LEKVVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQ
RDAQIIDELTGEKKDYFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSPE
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNTGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDQ
AISGARADISQFAPRIHTMKINAEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TSGEQAKEAIRRIEQITAEVEVGKIYTGKVARLADFGAFVTVLPGKDGLVHISQIADQRV
EKVSDFLTEGQEVQVKVLEIDRQGRVRLSMKEAVEKPATEAATDSAPEAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaccagttgttaaaacgtttcagtatggcaaccacactgtaacgctagaa
acaggtgttattgctcgtcaagcaacatcagcagtaatggttactatggatgataccgca
gtattcgtatctgttgttggtaaaaaagaagcagtagaaggccaagatttcttccctcta
actgtaaactaccaagagcgtacttacgctgcaggtaagatccctggtggcttcttcaaa
cgtgaaggtcgtccttcagaaggcgaaactcttatcgctcgtctgatcgaccgcccaatc
cgtccactgttcccagatggctttactaacgaagttcaagttatcgcaacagtaatgtct
gtgaacccagatgttcagccagacatcgtaactatgattggtacttctgcagcgcttgcg
atttcaggtatcccattcaacggtcctatcggtgctgcacgtgttggtcacatcgatggt
caactagtactgaacccaagtgaaaaagaactagcgacgtctcgtctagacctagttgtt
gctggtactgattctgcagttctaatggttgaatcagaagctgacaacctaactgaagaa
gagatgctttctgcagttgtatttggtcacgaccaacaacaaactgtaatcaatgcaatc
aatgagtttgcagctgaagttgctactcctgcatggaactggactgcacctgctgagaac
acagagcttaaagcgaaaattgctgaacttgctgaagctaaattggttgaagcttaccaa
atcactgaaaaaatggcgcgttatgaccgcatccatgaaatcagtgcagaagtaaacgag
aagctacttgctgaaaacgaagagttgaacctaaaagaagtacacactattttccacgat
ctagagaaagtagttgtacgtcgtagcatcatcgctggtaacccacgtatcgatggccgt
gaaaaagacatggttcgtgcactagacgtacgtactggcgttcttccacgtactcacggt
tctgcgctatttactcgtggcgaaactcaggctctagtaacggcaactctaggtactcaa
cgtgatgctcaaatcatcgacgaactaactggtgagaagaaagattacttcctactacac
tacaacttccctccatactgtgttggtgaaactggttttgtaggttcacctaagcgtcgt
gaaatcggccacggtaaactggctaaacgtggtattgcagcagtaatgccttctccagaa
gaattcccgtacacagtacgtgtggtttcagaaatcactgaatcaaacggttcttcttca
atggcttctgtttgtggtacttctctagctcttatggatgctggtgtaccaatcaagtct
tctgttgcgggtatcgcaatgggtcttgttaaagaaggcgacgatttcgttgttctttca
gacatccttggtgacgaagaccacctaggtgatatggactttaaagtagcaggtactaac
actggtatcactgcacttcaaatggacatcaaaattgaaggtatcactaaagagatcatg
caaattgctcttaaccaagcgcaaggtgcacgtaagcatatcctatctgtgatggatcaa
gctatctctggtgctcgtgcagatatctctcaatttgctccacgtatccacacaatgaag
atcaacgctgagaagatcaaagacgttatcggtaaaggtggtgcagttatccgtgctctg
actgaagagactggtacaactatcgaaatcgaagatgacggtacaatcaagatcgcagca
acttctggtgagcaagcgaaagaagcgattcgtcgtatcgagcaaatcactgctgaagtt
gaagttggtaagatctacacgggtaaagttgctcgtctagcagacttcggagcattcgta
actgttctgccaggtaaagacggtctagttcatatttctcaaatcgctgatcagcgtgta
gagaaagtgtctgacttcctaactgaaggccaagaagttcaagttaaagtacttgaaatc
gatcgccaaggccgtgttcgtctaagtatgaaagaagcggtagagaagccagctacagaa
gcagcaactgattcagctccagaagcagaataa
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