Vibrio ziniensis: G5S32_03915
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Entry
G5S32_03915 CDS
T07449
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03030
DNA replication
vzi03430
Mismatch repair
vzi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5S32_03915 (holA)
03430 Mismatch repair
G5S32_03915 (holA)
03440 Homologous recombination
G5S32_03915 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vzi03032
]
G5S32_03915 (holA)
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_03915 (holA)
Enzymes [BR:
vzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5S32_03915 (holA)
DNA replication proteins [BR:
vzi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5S32_03915 (holA)
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5S32_03915 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QIH41182
UniProt:
A0A6G7CGF0
LinkDB
All DBs
Position
1:complement(858503..859528)
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AA seq
341 aa
AA seq
DB search
MRIYADKLADSLQKSLLPVYLIFGGEPLLTQESVKAVEKKALSEGFEEKHHFTVDNGLDW
TQVYDCCQSLSLFCSRQIIVLEIAEAGLNATLSKSLATVAEYLNPDIVLIVIGNKLTKAQ
ESAAWFKTLIANGCLVNCLTPDLSRLPQFVMTRCRSLGLSPDAEAVQMLAQWHEGNLFAL
MQSLEKLALNYPDGQLNLIRLQESLDRHNHFTPFHWMDALLEGKANRAQRILRQLEAEAV
EPIILMRTLQKELLLLLQMKQQLNTLGIGAVFDKHRVWQNKRPLYSAALQRLSINKLQNL
IRLLAQTEVLAKTQYEQPSWPLINQLSVEFAVPQANIPLPV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagaatctatgccgataaactagcggattcattacagaaatcgttattacccgtttat
ctcatatttggtggtgaacccttactaactcaagagtcagtcaaagcagtagaaaaaaaa
gcgcttagtgaaggttttgaagaaaaacaccatttcacggtcgacaacggcttagattgg
acacaagtctatgattgctgccaatctttgagcctattttgcagcagacagatcattgta
ttagagattgctgaggctggccttaacgctactttatctaaatctctggcaacagtagca
gaataccttaacccagacattgtcctgattgtgattggcaacaaactgactaaagctcaa
gagagcgccgcttggtttaaaacgctgattgcgaatggttgtctggtcaattgtttaaca
cccgatttatctcgtctacctcagtttgtaatgacacgttgtcgctccctaggtttgagt
cccgatgctgaagcggttcaaatgctcgctcagtggcatgaaggtaatctttttgcattg
atgcaaagtttggagaaactggctctcaattatccagatggccaattaaaccttattcgt
ctccaagagtcgttagatagacacaaccatttcacgccattccactggatggatgcacta
ctagaaggcaaagcgaatcgagctcaaagaattttaagacaacttgaagcagaagctgtc
gagccaattattttgatgaggactttgcagaaagagctattactgctgctacaaatgaag
cagcaactcaacaccttgggaatcggtgccgtatttgataagcatcgagtatggcagaat
aaacgtccgctgtactctgcggctctgcaacgactatcaatcaataaattgcagaacctt
attcggttacttgctcaaactgaagtcttggctaagactcaatacgagcagcctagttgg
ccacttatcaatcaattaagcgtagagttcgccgttcctcaggcaaacatccctttgcca
gtgtaa
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