KEGG   Vibrio ziniensis: G5S32_04250
Entry
G5S32_04250       CDS       T07449                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10912  two-component system, repressor protein LuxO
Organism
vzi  Vibrio ziniensis
Pathway
vzi02020  Two-component system
vzi02024  Quorum sensing
vzi05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vzi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G5S32_04250
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    G5S32_04250
   05111 Biofilm formation - Vibrio cholerae
    G5S32_04250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vzi02022]
    G5S32_04250
Two-component system [BR:vzi02022]
 Lux family
  LuxQN/CqsS-LuxU-LuxO (quorum sensing)
   G5S32_04250
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_16 AAA TIP49 AAA_2 AAA_19 AAA_22 HTH_23 HTH_30 HTH_29 HTH_7 PIF1
Other DBs
NCBI-ProteinID: QIH41244
UniProt: A0A6G7CGN7
LinkDB
Position
1:936116..937516
AA seq 466 aa
MQHNYTPQKAKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGREAIESIAAREPDLILL
DLRLPDMTGMDVLHEVKQKSPDVPVIFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRV
TVNNAIRKASKLKNDVDGINNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAASDRQGAAELADG
GTLFLDELCEMDLELQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERSDDVIEIAYSLLGYMSKEEGKGFVRLSPEVVERFKRYEW
PGNVRQLQNVLRNVVVLNDGKEISQEMLPPPLNFPQQRNEPAEQPNSSTITVHEIFPLWM
TEKQAIEKAIEACDGNIPKAAGYLDVSPSTLYRKLQTWNEKEKESR
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgcaacacaattacacaccacaaaaagcaaaatacttattgatggtggaagatacggcg
tctgtggcggcgttgtatcgttcttacctcactccacttgaaatagacatcaatatcgtc
ggcactgggcgcgaggcgattgaaagcattgcggcgcgagaacctgatttaattcttctc
gatctcagattaccagatatgaccggcatggacgtattgcacgaagtgaaacaaaagtct
cccgatgttccggttattttcatgactgcgcacggctctattgatacagcggttgaggct
atgcgtcatggtgctcaggatttcttgattaagccttgtgaagctgatcgtttacgcgtc
acagtgaacaatgcgattcgtaaagccagtaagcttaagaatgatgttgatggtattaat
aaccaaaactatcaaggctttattggcagtagtcaaaccatgcaagcggtttaccggact
atagactcagcagcgagcagtaaagcgagtatctttatcactggagaaagtggtacgggt
aaagaagtgtgtgcagaagcgattcatgcagcgagcaaacgtggcgataagccgtttatt
gctattaactgtgccgcgattcccaaagacctcattgagagtgaactatttggccacgta
aagggggcctttacgggggctgcttcagatcgccaaggggcggctgaattggccgacggt
ggcacgctgtttctcgatgaattgtgcgaaatggatctagaattgcagacaaaattgctg
cgctttattcagaccggtacgtttcaaaaagtcggttcttctaagatgaaaagcgtggat
gtacgatttgtttgcgctaccaaccgagatccatggaaggaagtgcaggaaggtcgtttt
agggaagacttgtattaccgtctttatgtgattcctttgcatctaccacctttacgtgaa
cgtagcgatgacgttattgaaatcgcttattcgctattgggttatatgtcaaaagaagaa
ggcaaaggttttgtgcgtttgtctccagaagtggttgaacgctttaaacgctatgagtgg
ccgggtaacgttcgtcaattgcagaacgtattgcgtaacgttgtggtactgaatgatggt
aaagaaatatcacaagagatgttaccaccgccattgaactttcctcagcagcgcaatgaa
cctgccgaacagccaaacagcagtacgataacggtacatgagatatttcctctttggatg
acagaaaagcaagctatcgaaaaagcgatagaagcttgtgatggcaacattccgaaagcg
gctgggtatttggatgtcagtccttcaacgctatacagaaagctacaaacgtggaatgaa
aaagaaaaggaaagcaggtaa

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