Vibrio ziniensis: G5S32_04250
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Entry
G5S32_04250 CDS
T07449
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
vzi
Vibrio ziniensis
Pathway
vzi02020
Two-component system
vzi02024
Quorum sensing
vzi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5S32_04250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5S32_04250
05111 Biofilm formation - Vibrio cholerae
G5S32_04250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vzi02022
]
G5S32_04250
Two-component system [BR:
vzi02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
G5S32_04250
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
TIP49
AAA_2
AAA_19
AAA_22
HTH_23
HTH_30
HTH_29
HTH_7
PIF1
Motif
Other DBs
NCBI-ProteinID:
QIH41244
UniProt:
A0A6G7CGN7
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Position
1:936116..937516
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AA seq
466 aa
AA seq
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MQHNYTPQKAKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGREAIESIAAREPDLILL
DLRLPDMTGMDVLHEVKQKSPDVPVIFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRV
TVNNAIRKASKLKNDVDGINNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAASDRQGAAELADG
GTLFLDELCEMDLELQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERSDDVIEIAYSLLGYMSKEEGKGFVRLSPEVVERFKRYEW
PGNVRQLQNVLRNVVVLNDGKEISQEMLPPPLNFPQQRNEPAEQPNSSTITVHEIFPLWM
TEKQAIEKAIEACDGNIPKAAGYLDVSPSTLYRKLQTWNEKEKESR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacaattacacaccacaaaaagcaaaatacttattgatggtggaagatacggcg
tctgtggcggcgttgtatcgttcttacctcactccacttgaaatagacatcaatatcgtc
ggcactgggcgcgaggcgattgaaagcattgcggcgcgagaacctgatttaattcttctc
gatctcagattaccagatatgaccggcatggacgtattgcacgaagtgaaacaaaagtct
cccgatgttccggttattttcatgactgcgcacggctctattgatacagcggttgaggct
atgcgtcatggtgctcaggatttcttgattaagccttgtgaagctgatcgtttacgcgtc
acagtgaacaatgcgattcgtaaagccagtaagcttaagaatgatgttgatggtattaat
aaccaaaactatcaaggctttattggcagtagtcaaaccatgcaagcggtttaccggact
atagactcagcagcgagcagtaaagcgagtatctttatcactggagaaagtggtacgggt
aaagaagtgtgtgcagaagcgattcatgcagcgagcaaacgtggcgataagccgtttatt
gctattaactgtgccgcgattcccaaagacctcattgagagtgaactatttggccacgta
aagggggcctttacgggggctgcttcagatcgccaaggggcggctgaattggccgacggt
ggcacgctgtttctcgatgaattgtgcgaaatggatctagaattgcagacaaaattgctg
cgctttattcagaccggtacgtttcaaaaagtcggttcttctaagatgaaaagcgtggat
gtacgatttgtttgcgctaccaaccgagatccatggaaggaagtgcaggaaggtcgtttt
agggaagacttgtattaccgtctttatgtgattcctttgcatctaccacctttacgtgaa
cgtagcgatgacgttattgaaatcgcttattcgctattgggttatatgtcaaaagaagaa
ggcaaaggttttgtgcgtttgtctccagaagtggttgaacgctttaaacgctatgagtgg
ccgggtaacgttcgtcaattgcagaacgtattgcgtaacgttgtggtactgaatgatggt
aaagaaatatcacaagagatgttaccaccgccattgaactttcctcagcagcgcaatgaa
cctgccgaacagccaaacagcagtacgataacggtacatgagatatttcctctttggatg
acagaaaagcaagctatcgaaaaagcgatagaagcttgtgatggcaacattccgaaagcg
gctgggtatttggatgtcagtccttcaacgctatacagaaagctacaaacgtggaatgaa
aaagaaaaggaaagcaggtaa
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