Vibrio ziniensis: G5S32_09170
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Entry
G5S32_09170 CDS
T07449
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
G5S32_09170 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vzi01007
]
G5S32_09170 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vzi03016
]
G5S32_09170 (serS)
Enzymes [BR:
vzi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
G5S32_09170 (serS)
Amino acid related enzymes [BR:
vzi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
G5S32_09170 (serS)
Transfer RNA biogenesis [BR:
vzi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
G5S32_09170 (serS)
Prokaryotic type
G5S32_09170 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ERM_helical
HIP1_clath_bdg
CEP83_CC_1st
TMF_TATA_bd
CCDC39
Cast
SBP_bac_4HB
Baculo_PEP_C
CCDC110
Kazrin
DUF1664
DUF3086
FapA
Spectrin
PCRF
HH_YknX
Knl1_RWD_C
ATG14
FTR1_4HB
Motif
Other DBs
NCBI-ProteinID:
QIH42153
UniProt:
A0A6G7CJC9
LinkDB
All DBs
Position
1:complement(2008028..2009335)
Genome browser
AA seq
435 aa
AA seq
DB search
MLDSKLLRTELDETAAKLARRGFKLDVDTIRTLEEQRKSIQVEVENLQSSRNSISKQIGQ
LMAQGDKDGAEEIKKQIGSLGDDLDAKKSELDAVQAQLETITQTVPNVPDDSVPDGKDEN
DNVEVARWGEPKTYDFELKDHVDLGEMGGGLDFASATKITGARFIVMKGQFARLHRAIAQ
FMLDLHTEEHGYTEMYVPYLVNAESLFGTGQLPKFGKDLFHTEPLTEKVNDEEPRKFSLI
PTAEVPVTNLVRDTITDEADLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQI
TRPEDSMAALEELTAHAEKVLQLLELPYRKVVLCAGDMGFGSRKTYDLEVWVPAQQTYRE
ISSCSNMWDFQARRMQARFRRKGEKKPELVHTLNGSGLAVGRTMVAILENNQLADGRIEV
PAVLQKYMGGATHIG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctggattctaaattacttcgtacagagctggatgaaacagctgcaaaactggcacgt
cgcggttttaaactcgacgtcgatactattcgtacacttgaagaacaacgtaagtccatt
caagtagaagttgaaaatttacaatcctcgcgtaattcgatctctaagcaaatcggtcaa
ttgatggctcaaggcgacaaagacggcgctgaagagattaaaaaacaaattggttctttg
ggtgacgacttagacgctaaaaaatcagagttggatgctgttcaagctcaacttgaaacc
atcactcaaacagtaccaaacgtgccagatgattcggtaccagatggtaaagatgagaac
gacaacgtagaagttgcacgttggggtgaaccaaaaacttacgatttcgaactgaaagat
cacgtagatctcggtgaaatgggtggtggtctggatttcgctagtgcaacaaaaattacg
ggtgcacgttttatcgtgatgaaaggtcaatttgctcgtctacatcgtgcgattgctcag
tttatgctagatcttcacactgaagagcatggttatacagaaatgtatgttccttacctc
gtcaatgctgaaagtttgtttggtactggtcagcttcctaagtttggcaaagatctgttc
catacagagccgctaactgaaaaagtgaatgacgaagaaccacgtaaattctctctgatt
ccgacggctgaggtccctgttaccaacctagttcgtgacaccattaccgatgaagctgat
ctaccgttgaaaatgacggctcatacaccttgtttccgttcagaagcgggttcatacggt
cgtgatactcgtggtttgatccgtatgcaccaatttgacaaagtagagttggttcaaatt
actcgacctgaagattcaatggcagcacttgaagaactgactgcacacgctgagaaagta
cttcaacttctagaacttccttaccgtaaagtcgttctttgtgcaggtgacatgggcttt
ggttctcgtaagacttacgatctagaagtttgggtaccagcacaacaaacttaccgcgag
atctcttcatgttcaaacatgtgggatttccaagctcgtcgtatgcaagctcgtttccgt
cgtaaaggcgagaaaaaacctgaacttgtgcatacactaaatggttctggtttggctgtt
ggtcgtacaatggttgcgattcttgaaaacaaccaacttgcagacggtcgtatcgaagtt
ccagcggtacttcagaagtacatgggtggcgcaactcatattggttaa
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