Vibrio ziniensis: G5S32_11145
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Entry
G5S32_11145 CDS
T07449
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vzi
Vibrio ziniensis
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vzi01011
]
G5S32_11145
Enzymes [BR:
vzi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
G5S32_11145
Peptidoglycan biosynthesis and degradation proteins [BR:
vzi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
G5S32_11145
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
LysM3_NFP
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
QIH42505
UniProt:
A0A6G7CK73
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Position
1:2409847..2411421
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AA seq
524 aa
AA seq
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MRVQTSCLLALLLAGCQLNQTAEKTTTDEVEVNAPQQIKKAEVSSTQPVEHVEPVAEPKV
ITPQEQEDVWQRIAMQLTMGIPQHKSVDYYRTWYLKHPSHLQKVAQRAEPFLYLITEKIE
QRGLPLELALLPIVESAFDAFAYSHGSAAGLWQFVPATGKMYGLEQNFWYDGRRDVDAST
DAALTYLTNLSKRFDGDWQHAIAAYNSGGGRVSSAIRKNKNLGKPIDFFSLDLPDETSGY
VPKLLALADIIANQEKYGIQLPTIANKPVLKLVDPKEQLDLAIAAKYADLGVKELQSYNP
AYNQWATAPDGPFQLLLPVDKADAFLANVEKHRGEGMKLIRYQVKYGDSLSVIAAHHNTT
TKVIQTANNMSDNSIRIGQYLMIPTSVKDEKAYVLSATNRLEKTQSVARGKYKLSHTVVN
GDSLWTIARKHNVSTASLAKWNGMGPRDTLRIGQKLVIWKNNTDGAIIRTVFYKVRNGDT
LSDIAAKFKVKTSDIVKWNDLSNNKYLKPGQNLKLYVDVTKVSV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtacaaactagctgtctgttggctctcctattggcgggatgccaactcaaccag
acagcagaaaagaccacgacagacgaagttgaagtcaacgcacctcaacaaattaagaaa
gcagaagtatcctcaacacagccagttgaacatgttgagcctgttgctgaacctaaagtc
atcactccacaagagcaagaagatgtctggcaacgtatcgcaatgcaacttacgatgggt
attccacagcataagtctgttgattactaccgtacttggtatttgaaacatccaagccat
ttgcaaaaagtcgctcaacgtgcagaaccattcttatatctcataactgagaaaattgag
caaagaggcttaccgctagaattagcccttttgccaattgtagaaagtgcatttgatgcc
tttgcttattcacacggcagcgcggctggcttgtggcaatttgttcctgcaactggaaaa
atgtacggactagagcagaatttctggtacgacggtcgtcgtgacgtcgatgcgtcaaca
gatgcagctcttacatacttaaccaacttaagtaaacgttttgacggtgactggcaacac
gcgatcgcagcttataatagtggcggaggtcgagtttcaagtgctattcgtaaaaacaaa
aacttaggaaaacctatcgatttcttctctctcgacttacctgatgagaccagcggttat
gtgccaaaattactcgcactggcagacattatcgccaatcaagaaaaatatggtatccaa
cttccaactattgccaataaaccagtcttgaagttagtcgatcctaaagaacagttagat
cttgctatcgccgccaaatatgcagacttaggtgttaaagagctgcaaagttacaaccca
gcatataatcagtgggcgacagcgcctgatggaccattccagttacttctacctgtagat
aaagcggatgctttccttgcgaatgtagagaagcatcgcggtgaaggaatgaagcttatt
cgttatcaggtaaaatacggagatagtctgagtgtgattgctgcgcatcacaatacaacg
actaaagtaatccaaacggcaaacaatatgtctgataattcaatacgaatcggacaatac
ctgatgatcccaacatcagtgaaagacgagaaagcctatgtactaagtgcaactaaccgc
cttgagaaaacgcaatccgttgctagaggaaaatacaagctctctcatactgtcgtaaat
ggtgacagtctctggacgattgcccgtaagcataatgtatcgacagcgtcattggctaaa
tggaatggcatggggccaagagatacattacgtatcggacagaaactggtgatttggaaa
aacaacaccgatggtgccattatccgcactgttttctataaagtacgtaatggtgatacg
ctgagcgatattgccgccaagtttaaagtgaaaacatcagacatagtaaaatggaatgac
ttgtcgaataacaagtacctgaaacccggtcagaacttaaaactctatgtcgatgtgact
aaggttagtgtatga
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