Vibrio ziniensis: G5S32_11180
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Entry
G5S32_11180 CDS
T07449
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03030
DNA replication
vzi03430
Mismatch repair
vzi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5S32_11180 (dnaE)
03430 Mismatch repair
G5S32_11180 (dnaE)
03440 Homologous recombination
G5S32_11180 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vzi03032
]
G5S32_11180 (dnaE)
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_11180 (dnaE)
Enzymes [BR:
vzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5S32_11180 (dnaE)
DNA replication proteins [BR:
vzi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5S32_11180 (dnaE)
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5S32_11180 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QIH42512
UniProt:
A0A6G7CK87
LinkDB
All DBs
Position
1:complement(2416280..2419759)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAEMGMPAMALTDFTNLCGLVKFYGTAHNC
GVKPIIGADFTMRSEEFGDELTKLTILAKNNVGYKNLTLLISEAYLRGHVQHQPVLDKEW
LIKHAEGLIILSGGKQGEIGKALLKGNQPLVDKCVEFYQTYFADHFYIELTRTGRADEES
YLHFALEVAEKEGIPVVATNEVVFLTEEFFEAHEIRVAIHDGFTLEDPRRPKLYSPQQYL
RSEEEMCELFADIPEALQNTVEIAKRCNVTVRLGEYFLPAFPTEGMLETEYLVKKSEEGL
EDRLEFLFPDPEVRAERRPEYDERLQVELEVINNMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLIPPDPGMTLEKAFKAEPA
LPELYNSDEEVKELIDKCRILEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLKREGKAPVRIESIDLADPKSFTTL
KNSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDETWQHESLKETLEPTYGIILYQEQVMQIAQILAGYTLGGADMLRRAMGKKKPEEM
AKQRAVFEEGAIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTEKVVGLVDECMRMGLKVLPPDINSGLYRFNVDETGAIVYGIGAIKG
VGEGPIEAIQEARDKGGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMMA
SLNDAVKSASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVWLEGERETLGLY
LTGHPINAYLKELNRYTSCRLNEATPTRRDQSITVAGLVIAARVMTTKRGTRIGLMTLDD
RSGRMEVMLFSDALERYAELLEKDKILVISGQVSFDDFNGGLKMSAREVMDMGSAREKYA
RGLSISIEQSQIDEQFFERFSEILTPHRAGTVPVNVYYQRPDARARLVLGTEWRVTPSDT
LLDELQQLLGSDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccctaagtttatccacttacgcattcacagtgatttctccatggttgacggc
ctgtcaaaagtgcctcctttggttaaaaaagtggctgaaatgggcatgccagcgatggca
ttaaccgactttaccaacttatgtggcttagttaagttctatggcacggcgcataactgc
ggtgtgaaacctatcatcggtgctgatttcaccatgcgctccgaagagtttggtgatgag
ttaaccaaactgactatcctagcgaaaaacaatgttggttataaaaatctgaccttgctg
atttcagaagcatatctgcgtgggcatgtgcagcatcaacctgtgcttgataaggaatgg
ttaatcaagcatgccgaaggtttgatcattttgtcaggcggcaagcagggcgaaattggt
aaagctctgcttaaaggtaatcagccgctggttgataagtgcgtggagttttatcagacc
tattttgctgatcatttctacattgagcttactcgtactggtcgggctgatgaagaaagc
taccttcactttgcgttagaagtggctgagaaagaaggcattcctgtggttgccacgaac
gaagtggtatttctcacagaagaattctttgaagcacatgaaattcgcgtagcgattcac
gatggtttcacattagaagatcctcgtagacctaaactttacagccctcagcaatactta
cgctcagaagaagagatgtgcgagctatttgctgatatcccagaagcactgcaaaacaca
gtagagattgctaagcgctgtaacgtgactgtgcgtttaggtgaatacttccttcctgca
ttcccgacggaagggatgcttgaaacggaatacctggttaaaaaatcagaagaaggcttg
gaagatcgtttagaatttttatttcctgatccagaagtgcgcgcagagcgtcgacctgaa
tatgatgaacgtctgcaagttgagcttgaagttattaacaacatgggattccctggttac
ttcttgatcgtaatggagttcatccagtggtctaaagataacaatattcctgtggggcca
gggcgtggttcaggtgctggttcattagtggcgtatgcgctgaaaatcaccgatctcgat
ccgctcgaatatgacttactattcgaacgattcctaaacccagaacgtgtgtcaatgccc
gatttcgacgtcgatttctgtatggataagcgtgatcaagttattgaccacgtggcagaa
atgtacggacgtgatgcagtatcacagatcattactttcggtactatggcggccaaagcg
gttattcgtgacgtaggtcgtgtactgggacacccgtttggctttgtcgatcgtatttct
aagcttattccgccagatcctggcatgacactggaaaaggcatttaaagcggagcctgca
cttccggagttatataactctgatgaggaagtaaaagagctgattgataaatgtcgaatt
ctagaaggttgtactcgaaatgccggtaagcacgctggtggtgtggtaatttcgccaacc
actattaccgactttgcgcctatctatgctgatgcagaaggccattttccagttacccaa
tttgataagaatgacgtagaaacggctggtctggttaagttcgacttcttgggattacgt
accttaactattattgattgggctttagggctgattaaccctcgtttaaaacgtgaaggt
aaagctcctgtacgtattgagtcgattgatctagccgacccgaagtcattcactacactg
aagaattcagaaaccacggcggtattccagcttgaatctcgtggtatgaaagatctgatt
aagcgtcttcagcctgactgtttcgaagatatcattgcattggtggcactattccgtccg
ggacctctgcaatcaggcatggtggataactttatcgaccgtaaacacggccgagaagca
atctcttatcccgatgaaacgtggcaacatgaatcgttgaaagaaacgttagagccgacc
tacggcattatcctttaccaagaacaggtaatgcagattgcccagatcttagctggctat
actctgggcggcgcagatatgttgcgtcgtgctatgggtaagaaaaaaccagaagaaatg
gcaaagcaacgtgcagtatttgaagagggagcgatcaaaaacggcgttgatggcgaattg
tcgatgaaaatcttcgatcttgtagagaaattcgctggatatggctttaacaaatcgcac
tctgcagcctatgctttagtatcgtatcaaacactgtggttaaaaacgcacttcccagct
gagttcatggcagcggtaatgaccgccgatatggataacactgagaaagtggttggcttg
gtcgatgaatgtatgcgcatggggctcaaagtgcttccaccagacatcaattccggctta
tatcgctttaatgtcgatgaaacaggtgccatcgtgtatggtattggcgcgattaaaggt
gtgggtgaaggtcctattgaagcgatacaagaagcgcgtgataaaggtggttactttaaa
gacctgtttgatttctgtgcgcgtattgatttgaaaaaagtcaataaacgtgtaatcgaa
aaactgattctggcgggggctctggacagattaggcccacaccgtgctgctatgatggca
tcgcttaatgacgctgtgaaatcagcgagtcaacaccatcaggctgaagcatttgggcag
gcggacatgtttggtgttctgacagatgcacccgaagaagttgaacaaaaatatactcaa
gtacctgaatggccagaaaaagtttggctagaaggtgagcgtgaaactttggggctttat
ttgacggggcacccaattaacgcctatttgaaggaacttaatcgatatacaagctgtcgg
ttaaatgaggcaacaccaacacgccgtgaccaatcgattacagtagcaggtttagtgatt
gcggctcgagttatgacgaccaaacgcggcactcgaattggtctgatgactttagatgat
cgttccggtcgcatggaggtgatgttattctccgatgctcttgaacggtatgcagaattg
ctagaaaaagataaaattttggtcatttctggacaggtcagctttgatgacttcaatggt
ggccttaaaatgtcggcgcgcgaagtcatggacatgggcagcgcacgtgaaaaatatgcc
cgtggcttatcaatatcgatagaacaatctcaaattgatgagcagttttttgagcgtttt
agtgaaatactgacgcctcaccgagcaggaacggttcctgtcaatgtatactaccaacgc
cctgatgcgcgagcgcgtctagttcttggtactgaatggcgtgtcacacctagcgataca
ttgttagacgaattgcaacagctacttggcagtgaccaggtagaacttgaatttaactaa
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integrated database retrieval system
