Vibrio ziniensis: G5S32_11550
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Entry
G5S32_11550 CDS
T07449
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G5S32_11550 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_11550 (recC)
Enzymes [BR:
vzi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G5S32_11550 (recC)
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S32_11550 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QIH42584
UniProt:
A0A6G7CKH1
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All DBs
Position
1:complement(2501047..2504559)
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AA seq
1170 aa
AA seq
DB search
MFTVYHSNKVDTLKILLVHLIKAAPLENPFEKEQILVQSPGMSQWLKMALAEELGIAANI
DFPLPATFIWEMFTHVLPGVPKRSAFNKEAMTWKLMEVLPTQLELEAFSALKSYLKDDVD
QSKLYQLAEKIADIFDGYLVYRPDWIEAWENGNAVEEIGDEHPWQPILWKQLYDYTVIQQ
QQSHYHRANLYQRFIETLASGHVPLEKLPKRLFIFGISSLPPRYMDALKALGQHIDVHLM
FTNPCQHYWGDIRDRKYLARIENQRRKQLALSGQTLSVTGEISPLKGDIESNVAEDEMHI
SNAVGNSLLASMGKLGRDNLYLLAQDDNEEHELFIDIARETLLQQLQADILHLEEHQDDH
ILDSSTHKPTIHGQDGSLTIHACHSPMREVEVLHDELLAMFDRDPTLKPRDVIVMVADIN
AYSPYIQAVFGNAPGERFIPYSISDRTANQESPILNAFIQLVNLPHSRCLASELLELLET
PAMMSRFALDESEFELVKRWVEESGIRWGLDSTTAQEFDLPDTDQNTWQFGLSRMLLGYA
MPTSTSLFEHGDSVYAPYNEVQGMSAELAGKLARFIETVSRYRTLLTQTQSIDDWREVLN
NLLDDFFAVDLDGEMALKSIRDTLVSLKEQLVDAGYCEDIAPAIISEYLNNKLSGTRVSQ
RFLAGQVNFCTLMPMRSIPFKAVCLLGMNDGVYPRSMPPEGFDLMNGRTRRGDRSRRDDD
RYLFLEAMLSAQQKLYISYVGRSIQDNTERVPSVLVSELLEYCQQNYCLSGDESLPSDDS
GKKLVDKISTVHTLVPFSPQTFLSEAGSYAKEWLPVAQRQGTPAGEFNLPLDDYLLDATY
PLDLDLVELQRFWRLPVQYFFNRRLKVVFEPPLAVMEDDEPFALDGLNSYQLRDNLLDLL
LSVDATSDREATLHHFIQQQRAQGKLPVGAFGELEFEVNRVQTEEVLEKIHFLCQSPLED
CEVNITSHVLGESKPVQLNGWLTKRFQSGLVRYRSGSIRSQDLLSAWIDHLCHAAMGFVS
KTHLVGYDRKDGVLHQILPPVESRELAKELLDELIRLFYQGMTSPIAYFPKTALACIEAG
FSRGKWVEDDEKSLKKMAECFNDGFATSGEGNNAYIARIWSSWNDELAQQAKLLSCLVLQ
TPRLQLMDSTDVIDSADAVFEANRVGSKDE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
gtgtttactgtttaccattccaataaagtcgataccttaaaaatcttgctggtacatcta
atcaaagccgcaccgctggaaaatccctttgaaaaagagcaaatcttggttcaaagcccg
ggtatgtcacagtggttgaaaatggcgttggcagaagagctgggaatcgcagccaacatc
gattttccactaccagcgacttttatttgggaaatgttcactcatgttctgccaggcgtt
cccaaacgcagtgcctttaacaaagaggcaatgacgtggaagttaatggaagtgcttccg
actcagttggagttagaagcgttctctgcgcttaaaagttacctcaaagacgatgttgac
cagtctaagctctaccaacttgcggaaaaaatcgcagatatttttgatggctatctggtg
tatagaccagactggattgaagcttgggagaatggcaacgcggttgaggaaatcggtgac
gagcacccgtggcaacctattttgtggaagcaactttacgactacacagtgattcaacag
cagcaatcccattatcaccgagccaacttatatcagcgttttattgaaacgctagcgagt
gggcatgtaccgcttgaaaaattgccgaaacgactgtttatctttggcatttcctctttg
cctccacgttatatggacgcattaaaagcattaggccaacacattgatgtgcatctgatg
ttcactaacccttgtcagcattactggggagatattcgagaccgtaagtatctggctcga
atcgaaaaccagcgtcgtaaacaactggcattaagtgggcaaactctctcagtgacgggc
gaaatatcaccgctcaaaggtgacattgaaagtaatgttgccgaagatgaaatgcatatc
agcaatgcggtaggtaacagcttgttggcatcaatgggcaaattggggagagataacctc
tatttgctggcacaagatgataatgaagagcacgagctgtttatcgatattgctagagaa
accttacttcaacagttacaagcggacattttgcatcttgaagagcatcaagatgatcac
atcctcgatagcagcactcataaaccgaccatccacggtcaagatggctcgttaactatt
catgcttgccacagcccgatgcgagaagtggaagtgctgcatgatgaactgttagccatg
tttgaccgtgatccgacattgaagccgcgagatgtgattgtgatggtggcggatatcaat
gcctacagcccctatattcaggcggtgttcggtaatgcgcccggtgaacgttttatcccg
tactcgatttcagaccgaacagccaatcaagagagtccaatcttaaatgctttcatccag
ttggtgaatttgccgcattctcgctgtttggcgtctgagctgttagagctgttagaaacg
ccagcgatgatgagtcgttttgcattggatgaaagcgaatttgaattggtaaaacgttgg
gttgaagagtcaggtattcgctggggattggacagtactactgctcaagaatttgatctt
ccagacacagatcaaaatacctggcagtttggactttctcgtatgttgcttggctacgcg
atgccgacatcaaccagcctgtttgaacatggcgacagtgtgtatgcgccttataacgaa
gttcagggcatgagcgctgaacttgctggcaaattggcgcgctttattgaaaccgtgagc
cgttaccgaaccttactgactcaaactcagtcgatagatgactggcgggaagtattgaac
aacttgcttgatgatttcttcgctgtcgatctggatggtgaaatggcgctgaaatccatt
cgcgatacgctagtttcattaaaagagcagctggttgatgcaggttattgcgaagatatc
gcgccagcgatcatcagcgaatacctcaataacaagctgtcgggtacacgagttagtcag
cgctttttagccgggcaagtgaacttctgtactttgatgccaatgcgttctatcccattc
aaagcggtctgtttgttaggaatgaatgatggcgtttaccctcgttctatgccgccggaa
ggctttgatttaatgaatggtcgaactcgaagaggcgatcgttcacgccgtgatgatgat
agatacctgttcttggaagcgatgctctctgcgcagcaaaaactatatatcagctacgtt
ggacgttccattcaagacaatactgagcgtgttccatcggtgttggtgagtgaattactc
gaatattgtcagcagaactactgtttatctggcgatgaatctctgccaagtgatgactca
ggcaaaaagttggtggataagatttccactgttcacactttggtgccattcagtccacaa
acatttttaagtgaagcaggaagctacgcaaaagagtggctgcctgtggcgcagcgtcag
ggtactccagctggcgaattcaatctgccattggatgattacttactggatgcgacttat
ccgttagatctggatttggttgagctacagcgtttttggcgattgccagttcagtacttt
ttcaatcgtcgcttaaaagtggttttcgaaccgcctttagcggtgatggaagatgatgag
ccgttcgcactggatggtctgaatagctatcaactgcgtgataatttgcttgatctgtta
cttagcgtagatgcgacaagtgatagagaagctacattacatcacttcatccagcagcaa
cgagctcagggcaaactgcctgttggcgcttttggtgaattagagtttgaagtgaaccga
gttcaaactgaagaagtgctagagaaaattcactttctctgccaatcaccgctagaagat
tgtgaagtgaacatcaccagccatgtgcttggagagtctaaacctgttcagttaaatggt
tggttaaccaaacgcttccaatcagggctagtgcgttatcgcagtggttcaattcgctcg
caagatttgttgtcagcatggatagatcatctgtgtcacgctgcgatgggctttgtcagc
aaaactcatctggtgggctatgaccgtaaagatggtgtgcttcatcaaatcttgccacca
gtagaaagccgagagcttgctaaagagctgttggacgaactgattcgtcttttctatcaa
ggaatgacatccccgatcgcttatttcccgaaaacagcgctagcttgtattgaagctggg
tttagccgcggaaaatgggttgaagatgatgagaaatctttgaaaaaaatggctgagtgt
tttaacgacggatttgccacttctggtgaagggaacaatgcgtacatcgctcgaatttgg
tcatcttggaatgacgaactcgctcaacaggcaaaattactctcttgcttagtactacaa
acgccaaggctacagttaatggatagtactgatgtaatagatagtgctgatgcagtattc
gaagctaatagagtgggtagtaaagatgagtaa
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integrated database retrieval system
