Vibrio ziniensis: G5S32_14005
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Entry
G5S32_14005 CDS
T07449
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi00541
Biosynthesis of various nucleotide sugars
vzi01100
Metabolic pathways
vzi01250
Biosynthesis of nucleotide sugars
Module
vzi_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5S32_14005 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vzi01005
]
G5S32_14005 (rfaD)
Enzymes [BR:
vzi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
G5S32_14005 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vzi01005
]
Core region
G5S32_14005 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
ThiF
NAD_binding_4
adh_short
KR
Phage_T7_Capsid
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QIH42990
UniProt:
A0A6G7CLP6
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All DBs
Position
1:3027466..3028407
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNARGINDILVVDHLKNGRKFQNLVDLDITDYMDRDDFLTQI
MAGDDFGPIDAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GETDTFVEEPQYEGALNVYGYSKQQFDNYVRRLWADADAHGEKLSQVTGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSEHFKRDFVYVGDVAAVNLWFMENGKSGIFNL
GTGNAESFNEVAKAVIQYHGKGEVETIPFPEHLKGAYQEFTQADLTKLRAAGCDHTFKTV
AEGVAEYMTIINK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggcgctggcatgattggcagcaatattgttaaggctctgaat
gcgcgcggtattaatgacattttagtggtcgatcacctaaaaaatggccgaaaattccag
aatttagtcgaccttgatattaccgattacatggatcgtgatgatttccttacgcaaatc
atggcgggtgatgattttggtcctatcgacgctattttccatgaaggtgcttgctctgcg
accactgagtgggatggcaagtacatgatgctcaacaactatgagtattcaaaagagctt
cttcattactgcttagatcgtgagattccattcctttatgcatcatcggcagccacttac
ggtgaaaccgatacttttgttgaagagcctcaatatgaaggtgcactaaacgtgtacggt
tactctaaacagcagtttgataactatgttcgtcgtctatgggcagatgctgacgcacac
ggtgaaaaactgtctcaagtgacgggtttccgttatttcaatgtgtacggtccacgagag
cagcacaaaggttctatggcatcggttgctttccacctaaataaccaaatgaacgctggt
gaaaatccaaaattgttcgcaggcagcgagcactttaagcgcgacttcgtctacgtgggc
gatgtagcggcagttaacctatggtttatggaaaatggtaagtctggcattttcaaccta
ggcacaggcaatgcggaatctttcaacgaagtagcaaaagccgttatccagtatcacggt
aaaggtgaagtggaaaccattccattccctgaacacttgaaaggtgcatatcaagaattc
actcaggctgatctaaccaaattgcgtgctgcaggttgtgatcacacctttaaaacagtc
gctgaaggtgtggctgaatatatgaccattatcaacaaataa
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