Vibrio ziniensis: G5S32_14120
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Entry
G5S32_14120 CDS
T07449
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G5S32_14120 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_14120 (mutM)
Enzymes [BR:
vzi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
G5S32_14120 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
G5S32_14120 (mutM)
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G5S32_14120 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_6
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIH43010
UniProt:
A0A6G7CLR7
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All DBs
Position
1:complement(3048805..3049614)
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AA seq
269 aa
AA seq
DB search
MPELPEVEVSRMGISPHLVGQTVQSIVFRTPKLRWDIPADLKLMEGLVIRSISRRAKYLL
IETEKGTAIVHLGMSGSLRVLDGFIAAGKHDHVDLTLSNGKVLRYNDPRRFGAWLWSPVG
ESHTVLANIGPEPLTDAFTADYMLEKAKSKRIAVKQFIMENKIVVGVGNIYASESLFAAK
IHPLRPANSLKLDEWQSLVTEIKSVLKTAIAQGGTTLKDFAQVDGKPGYFAQELQVYGKA
KQPCPACGEAITDLKIGQRNTFFCSLCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttaccagaagttgaagtgagccgtatgggcatttctcctcatctagtggga
cagacagtacagtcaatcgtgtttcgtacaccgaaactgcgttgggatattccggcagat
ctcaagttgatggaagggctcgtaatacgctctatctctcgacgagccaaatacttattg
attgaaacagagaaaggaacggcaatcgtacacttgggtatgtctggatcactgcgagtg
ctggatggttttattgccgcaggtaaacacgatcacgttgatctgactctgagtaatggt
aaggttttacgctataacgatcctcgccgctttggcgcttggctttggtctcctgttggg
gaatctcacaccgtattagccaatattggccctgaaccgttaacagacgcatttactgcg
gattacatgctagagaaagcgaaaagtaagcgtatcgccgttaagcagttcattatggaa
aacaaaattgtggtaggagtggggaacatctacgccagtgagtcgctatttgccgcgaaa
atccatccactacgccctgcgaactcacttaaactggatgagtggcaaagcttggtaaca
gaaataaaaagcgtattaaaaaccgccatcgcacaaggtggaactacgctgaaggatttc
gctcaagtcgatggtaaacccgggtattttgctcaagagttgcaagtgtatggcaaagct
aaacagccttgcccagcctgtggcgaagcgattactgatctaaaaatagggcagagaaat
acctttttttgttctctctgccaaaagtag
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