KEGG   Vibrio ziniensis: G5S32_15240
Entry
G5S32_15240       CDS       T07449                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
vzi  Vibrio ziniensis
Pathway
vzi02020  Two-component system
vzi02040  Flagellar assembly
vzi05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vzi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    G5S32_15240
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    G5S32_15240
  09142 Cell motility
   02040 Flagellar assembly
    G5S32_15240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vzi03021]
    G5S32_15240
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vzi02035]
    G5S32_15240
Transcription machinery [BR:vzi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     G5S32_15240
Bacterial motility proteins [BR:vzi02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    G5S32_15240
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 Seryl_tRNA_N DUF7801 EIAV_Rev Amdo_NSP_1-3
Other DBs
NCBI-ProteinID: QIH43354
UniProt: A0A6G7CMQ3
LinkDB
Position
2:72061..72789
AA seq 242 aa
MLDMQYQDAYSSSDEICTPTVAIDENRLLSQYQHLVKRISNQLRVHANTHCSVEDMQQIG
LIGLLEAGRRYGNIDDPNFPAFAVCRIRGAILDELRRLDWRSRKTRQDAHELNDVTRDLT
RKLGRQPSESEIIEALGTDGKDYHSRLNALVAGEMQSLDQLIENGIENYSEDSHDSIAHE
HTRRSLEHAVEQLNKRDQLMLNLFYQHELNLNEIALVLDLTPARVCQLHKQALNQLNHHL
SS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttggatatgcagtatcaagatgcctacagcagttctgatgagatttgcacccccaca
gttgcaatcgatgaaaaccgcttacttagccaatatcaacatctagttaaacgtatttca
aaccaacttagagtccatgccaatactcactgcagcgtggaagatatgcagcagatcgga
ttaattggcttactcgaagctgggcgtcgttacggcaatattgatgacccaaacttccct
gcatttgccgtgtgccgtatccgaggggcgattcttgatgaactacgtagactcgactgg
cgatctagaaaaacacgtcaagatgcacatgaactcaacgatgtcactcgtgatttaact
cgtaagctcggccgtcagccgtcagaaagtgagataattgaagctctgggaactgacggg
aaagattaccactctcgactaaatgccttagttgcaggtgaaatgcagagcctggatcaa
ctgattgaaaacggtatagaaaactattccgaagatagccacgacagtatcgctcatgag
catacacgtcgcagcttagaacacgctgttgagcaactaaacaaacgagatcaactgatg
ctgaatctgttttatcaacacgaacttaacttaaacgaaatcgcgctcgtactcgattta
acaccagcccgtgtttgtcagttacacaaacaggcactcaaccaactcaatcatcatttg
tcttcttag

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