Vibrio ziniensis: G5S32_15305
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Entry
G5S32_15305 CDS
T07449
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vzi
Vibrio ziniensis
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_15305
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G5S32_15305
Archaeal homologous recombinant proteins
G5S32_15305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_21
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QIH43366
UniProt:
A0A6G7CMT8
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All DBs
Position
2:complement(87283..90324)
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AA seq
1013 aa
AA seq
DB search
MRPVRLSIQAFGPFAGKEVVDFTSLGASPLFLINGPTGAGKSSILDAICFALYGETTGSE
RTGDQMRCDYADAELLTEIEFEFELAGRGYLVTRIPDQETLKKRGEGTTKKTHSATLVEL
VNGEQKLLANRPNPVAKAMVDLIGLDVKQFRQVMVIPQGKFRELLVANSKEREQIFGQLF
QTQIYTQIERALFDKAAGIRKEKDEFDNQIKGALNVVSVASEEELKEEQTKLEPELKQGE
QAYQTLQQQLDEAKKLRNLALELKQKFAQKAEIEKAVAEHQSQLAGVELLRQKRVKARKA
LALDLPFNQWVSATKQFEQTIKSVAEKQQQTSQIKLQFEQNEAVWKQAVHNAQIVPELSQ
QLYQLEEVGKKYRALDDKQKALIVAQQTFTKTKAEEEELEKQLKALDGEIQAKRAEYEQT
SHAVSSLDAKRLSLGNIAEQIKIRQSSDQLSEQQIKLKQNVVVAENAYKEAQQMTANAKR
EADKLEMIWHTNQAAELAKSLSEGDACPVCGSLEHPHLASFTGDVVTRADVKNARDEQQR
RATNELEALKNQQLSLSNLAQLERELSQLLAKIAEQAIPELAQLEQTKVALEKEIQTLSL
MQPQVLKSQLETLEGRLLQTKANLEKFIVSTAESKHAVTVLETEVATLREGISSGFENVE
QVRSQYVAVKKQIEDVQKAEQTAQQQFAEVQKQLSAIESSLSDALTLQKQWSQEKQVTEK
EWLDALSASEFENQEAYLNAKLVESAIAELESSIRQFEDKGASLKTQLESINNELKDQPL
PDLEPLEQVLATKQQEVDQALQTYTHLRSRTDSLTQVQQKLTALYAKNEELEKAYQVFGT
LSDIATGKTGARVSLHRFVLGVLLDDVLIQASQRLQLMSKGRYLLKRKEERAKGNSGSGL
DLMVEDGYTGKWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSLD
PESLDLAIQTLIDLQQGGRTIGIISHVSELKEQISLRLDVEASRTGSSIKLVA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccagtccgattatcgattcaggcatttggtccttttgctggcaaagaggtggta
gatttcaccagccttggtgcttcaccattgtttctaattaatggtccaacaggggctgga
aaaagctcgattctagatgcgatttgttttgccttgtacggagaaacgacgggcagcgaa
cgtactggcgatcagatgcgttgtgattacgcggatgcagaactgctcactgaaattgag
ttcgagtttgaattggcaggtcgaggttatctcgtcactcgcattccagatcaagaaacg
ctgaaaaagcgtggagaaggcacaaccaagaaaactcactcagccacgctggtggaactc
gttaatggtgagcagaagttgctagctaacagaccgaatccagttgccaaggctatggtt
gatttgattggcttggatgtgaagcagttccgtcaggttatggtgattccacagggtaag
tttcgagagctcttggttgcgaactctaaagaacgtgaacaaatctttggtcagctattc
caaacgcagatttatacacaaattgaacgtgcgctgtttgataaagctgcgggtattcga
aaagagaaagacgagtttgataaccagataaaaggtgcattgaatgtcgtttctgtcgcc
tctgaagaagagttaaaagaagaacaaaccaagttagaaccagagttgaaacaaggtgag
caggcttatcaaacattgcaacagcaactggatgaagcgaagaaactgcgcaacttggcg
ttggagctgaagcagaaatttgcgcaaaaagctgagattgaaaaagccgttgctgaacat
cagtcacaactggctggcgttgaattattgcgccagaaaagagtaaaagcgagaaaagcg
ctagcgttggatttgcctttcaatcagtgggtaagtgcgacaaagcagtttgaacaaacg
ataaaaagcgttgcagaaaagcagcagcaaacttcgcaaatcaagcttcagtttgaacaa
aacgaagcggtttggaagcaagcagttcacaatgcgcagattgtcccagaactgtctcaa
cagctttatcaacttgaagaagtcggcaaaaagtaccgcgccttagatgataaacaaaag
gcacttatcgttgctcagcaaacttttaccaaaacgaaagcagaggaagaggaactagag
aaacagctaaaggcattagatggtgagattcaagccaaacgagcggaatacgagcaaacc
tcgcacgcggtgtcgagcttagatgcaaaacgtctttctctggggaacattgctgaacag
attaagattcgccaaagcagtgaccaattaagtgagcagcaaatcaagctcaaacagaat
gtggtggtggctgaaaacgcttataaagaagcccagcaaatgacagccaacgctaagaga
gaagctgataagctagaaatgatttggcacaccaaccaagcggcggagttggctaaatca
ttaagcgaaggtgatgcttgtcccgtatgtggaagcctagaacacccgcatttagcaagc
tttaccggtgatgtggttactcgcgctgatgtgaaaaatgcccgcgacgaacagcaacgc
cgtgcgacaaatgagctggaagctctgaagaatcagcagttatcgctatccaatcttgct
cagcttgaacgtgaactgagtcagttgcttgctaagattgcagagcaagcgatacctgaa
ctcgcgcagcttgagcaaaccaaggtcgcgttggaaaaagagatccaaaccctttcgcta
atgcagccacaagtattgaaatctcagttagaaacgctggaaggacgtctgctacaaacc
aaggctaaccttgaaaaattcattgtgagcaccgcagaaagcaaacatgcggtgacagtg
ctagaaaccgaagtagctactttgcgtgaaggtatctcgtctgggttcgaaaacgttgaa
caggttaggagccaatacgtagcggttaaaaagcaaatcgaggatgtgcaaaaagcggaa
cagactgcccagcaacagtttgctgaagtccaaaagcagctttcagcgattgaatcatca
ttgagtgatgcactcactctacaaaagcaatggtcacaagagaagcaagttaccgaaaaa
gaatggttggatgctttgtcggcgagtgagtttgaaaatcaagaagcttatttaaatgct
aagttggttgaatccgccatcgctgagcttgagtcttccattcgtcagttcgaagacaaa
ggcgcatcgctcaaaactcagcttgagtcgatcaataacgaactaaaagatcagccgcta
cctgatttggaaccgctagagcaggtattggcgaccaaacaacaagaagttgaccaagca
ttgcaaacttatactcatctccgctctcgaacggatagtcttactcaggttcagcagaaa
cttaccgctctctatgccaaaaatgaggaactggaaaaagcctatcaggtgtttggcaca
ttgagtgatattgctacgggtaaaacgggagccagagtaagtctgcatcgttttgtgctg
ggtgtacttctggacgatgtgttgattcaggcgtcgcagcgattacaactgatgagcaaa
gggcgctacttactcaagcgcaaagaagaacgtgcaaaaggcaatagtggttcagggctg
gatcttatggtggaagatggctacacagggaaatggcgtgatgtcgcaaccctatcaggc
ggtgagtcgtttatggcggcgctttctcttgctctgggattgtcagatgtagtgcagtcg
tacagtgggggtattcgtctcgatacgctgtttattgatgaaggctttggtagcttagat
cctgagtcactcgatttagctatacaaactcttatagatctacagcagggcgggcgaacc
ataggcatcatttcccacgttagtgaacttaaagaacagatttcactacggttagatgtg
gaagcgtctagaacgggcagttcgataaagttggttgcttaa
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