Vibrio ziniensis: G5S32_17500
Help
Entry
G5S32_17500 CDS
T07449
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
vzi
Vibrio ziniensis
Pathway
vzi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G5S32_17500 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vzi03000
]
G5S32_17500 (nifA)
Transcription factors [BR:
vzi03000
]
Prokaryotic type
Helix-turn-helix
Other families
G5S32_17500 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
HTH_8
AAA_5
AAA
AAA_3
bpMoxR
Mg_chelatase
AAA_2
MCM
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QIH43779
UniProt:
A0A6G7CNW4
LinkDB
All DBs
Position
2:complement(560127..561803)
Genome browser
AA seq
558 aa
AA seq
DB search
MTDEMTLLNLERRLLAAMYKISSVLNTSLNYVESSDKILQVLHDECALQCGMLTILDSTR
DILLIKSVHSPQPNSAAQHKQVSYKIGEGLVGEVLRQGSSIVLHNLGSDQRFADKLALYD
YEKPFICVPLKDANGKVIGALSAQPPKFVEGFITLQTNFLNMIANLIAKNVQLAYKVEIH
QQQLVDERDNLRRKVRNNYSFRNLVGHTKSMRQIFEQIRLVSRWDSTVLIRGESGTGKEL
VANAIHYNSPRASLPFVKLNCAALPDNLLESELFGHEKGAFTGAVKQRKGRFEMADNGTI
FLDEIGETSPAFQAKLLRVLQEKEFERVGGTTTISVNVRIIAATNRYLEQEVAQGNFRED
LYYRLNVMPMYLPPLRERLQDIPELAEHMIQNLSKAQQRKLTLSDEAIRLMMSHPWPGNV
RELENTLERASVLCESGVIGPELITLNKSQPVFQTPAHQTGNYFSQNNLAPNNHNQSNFS
QNNHSPMNPAHPASPNGASMPDYPHSSQEMPTGDERDMVIDALERSGWVKAKAARLLNMT
PRQIAYRIQIMNIEMKQI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgaaatgactttattgaacttggaacgtcggttactggcggccatgtacaag
atttccagtgtgctgaataccagcctcaactatgtggagtcgtccgataaaatcctgcaa
gtgctgcacgatgagtgcgctttgcaatgcggtatgttaacgatactcgacagtacacga
gacatattgctgatcaaatcggttcactctccacaacctaactcagcagcgcaacacaag
caggtgtcttataaaatcggcgaaggattggtgggcgaagtcctgcgccaaggcagctcc
atcgtgctgcacaatcttggcagcgaccaacgctttgcggacaagctggcactgtatgat
tacgaaaaaccgtttatctgcgtccctttgaaagatgccaatggcaaagtgattggcgct
ttgtctgctcagccaccgaagtttgtggaaggcttcatcaccctgcaaaccaacttcctg
aacatgattgccaacctaatcgctaaaaacgttcagttggcatacaaggtggagatacat
caacagcaattggtggatgagcgcgacaacttaagacgtaaagttcgcaacaactacagc
tttcgcaatctggttggacataccaaatccatgcgccagatcttcgagcagatccgactg
gtctcgcgttgggattctaccgtgcttattcgtggtgaatccggtacgggtaaagagctg
gttgccaacgctattcactacaattcaccaagagccagcttgccctttgtaaaactgaac
tgtgcagctttgccagacaacttgcttgaatcagaactatttgggcacgaaaaaggcgcg
tttacgggagcagtgaagcagcgcaaaggtcgatttgaaatggcggacaacggcacgata
ttcctcgatgaaatcggtgaaaccagccctgcgtttcaagcaaagctgctgcgagtttta
caggagaaagagtttgaacgtgtgggtggaaccaccaccatttcggttaacgtgcgcatc
atcgcagccactaaccgttaccttgagcaagaagtggcgcaaggcaatttccgtgaggat
ctttactatcgcctcaacgtcatgcctatgtatttgccaccactgcgtgaacgtctgcaa
gatatacctgaacttgctgagcacatgatccagaacctgagtaaagcgcagcaacgtaaa
ctgacactgagcgacgaagcgattcgtttgatgatgtcgcacccttggccgggtaacgtg
cgagaacttgaaaacactctcgagcgagcgtcggtactgtgtgaatcaggggttattggc
ccagaactcatcacgctgaacaagtcgcaacctgttttccaaactcctgcgcatcaaacg
ggcaactacttttcgcaaaataaccttgctcctaacaatcacaatcaaagcaatttttct
caaaacaatcattccccaatgaatcccgcgcatcctgcttcacccaatggagcatcaatg
ccggactatcctcattcatcccaagaaatgccaacgggagatgagcgagacatggtgatt
gatgcacttgagcggtcaggttgggtgaaagcgaaagcggcacgattgcttaatatgaca
cctcgtcaaattgcctatcgtattcagattatgaacatagaaatgaaacagatatag
DBGET
integrated database retrieval system
