Vibrio ziniensis: G5S32_18055
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Entry
G5S32_18055 CDS
T07449
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vzi
Vibrio ziniensis
Pathway
vzi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
G5S32_18055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vzi03000
]
G5S32_18055
Transcription factors [BR:
vzi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
G5S32_18055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_24
HTH_23
HTH_40
TubC_N
HTH_VMAP-M9
HTH_10
HTH_Tnp_ISL3
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QIH43885
UniProt:
A0A6G7CP54
LinkDB
All DBs
Position
2:681783..682457
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AA seq
224 aa
AA seq
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MTEGKKLNVRLLSDVCMQSRLLKDALETKLPIKIEISPFCDIWMQENNPSCHEIQFILID
YARLDDHGLSDYASFKHLCCIDAREVVLNCPSDIEVKDLFKWHSLAGVFYADDDIDTLVK
GMGKILKGEMWLTRRLAQEYILHYRAGNSVVTSQMFSKLTKREQQIIKLLGSGASNIEIA
DQLYVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGLEEVSQ
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagggaaaaaactaaacgtacgattactttcagatgtttgcatgcaatcacgt
ttacttaaagatgctttggaaactaagcttccaataaaaatagaaatatcgcctttttgt
gatatttggatgcaagaaaataacccttcgtgtcatgaaattcagtttatcttgattgat
tatgcccgtttggatgaccatggattgtctgattacgcttcatttaaacatctgtgctgc
attgatgctcgtgaagttgtgttgaactgccctagtgatatagaagtaaaagatttattt
aagtggcatagcttggctggcgtattttatgcggatgatgacattgacacactcgtcaaa
ggaatgggtaagatcttaaaaggcgagatgtggcttactcgtcgtttagctcaagaatat
attctacattatcgtgcgggtaactctgtggtcacatctcagatgttctcaaaattaaca
aagcgcgaacaacagataataaagttgcttggtagtggtgcatccaatattgaaatcgcg
gatcagctttatgtaagcgaaaatacagttaagactcatcttcacaatgtatttaagaag
atcaatgctaagaatcgtctccaagcattaatttgggcaaaaaacaatattgggctcgaa
gaagtcagccaatag
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