Candidatus Woesearchaeota archaeon NC_groundwater_85_Ag_S-0.1um_31_13: HYS32_03745
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Entry
HYS32_03745 CDS
T10191
Name
(GenBank) exosome complex protein Rrp42
KO
K12589
exosome complex component RRP42
Organism
war Candidatus Woesearchaeota archaeon NC_groundwater_85_Ag_S-0.1um_31_13
Pathway
war03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
war00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYS32_03745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
war03019
]
HYS32_03745
Messenger RNA biogenesis [BR:
war03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
HYS32_03745
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
HYS32_03745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QQG38690
UniProt:
A0A7T5R6Y7
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All DBs
Position
608270..609043
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AA seq
257 aa
AA seq
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MLQINKEYINLLLTHDQRVDGRKLEQYRDIKVEYNISENAEGSAKVSIGDTVVLAGVKMD
VGTPFTDKPDQGSIVVGAELLPLASEDFELGPPSGDAIELSRVVDRGIRECQAVDFKKLC
IKEGEKVWMLFIDIYPLNDAGNLQDAAFLAAIAALKTAVFPKLENDKVVFGEFTKEKITL
QRVPIECTLLKIGDKIVLDPTLEEERALDARLTVAVTEENKVCAMQKGGEKGLSMDDIDK
MITLAIEKTQELRKNLK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagattaataaagaatacattaatttattattgactcacgatcaaagagtagat
ggtagaaaattagagcaatacagggatattaaagtagagtataacatcagtgaaaacgca
gaagggtctgcaaaagtttctattggtgatacagttgttttagccggtgttaagatggat
gtaggaactccttttactgataaaccagatcaaggctctatagttgttggcgcagaatta
ttgcctctagcgtcagaagattttgaattaggtcctccatcgggagatgcaatcgaactt
tcaagagttgttgatcgtggaattagagaatgccaggctgtagacttcaaaaaactctgc
attaaagaaggagaaaaagtatggatgctatttattgatatttaccctttaaatgatgct
ggtaatttgcaggacgcagcttttttagcagcaatagcagctttgaaaacagctgttttt
ccaaagcttgaaaatgataaagtagtttttggggaatttacaaaagaaaaaataactctc
caaagagttcctatagagtgcacattattaaagattggagataaaatagttttagacccg
actttagaggaagaaagagcattggatgcaagactaacagtagcagtaacagaagaaaat
aaagtatgtgctatgcaaaaaggtggagagaaaggcttaagtatggacgacattgacaaa
atgatcacgcttgcaatagaaaaaacacaagaacttagaaagaacttaaaatga
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