Candidatus Woesearchaeota archaeon NC_groundwater_85_Ag_S-0.1um_31_13: HYS32_04000
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Entry
HYS32_04000 CDS
T10191
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
war Candidatus Woesearchaeota archaeon NC_groundwater_85_Ag_S-0.1um_31_13
Pathway
war03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
war00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYS32_04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
war03019
]
HYS32_04000
Messenger RNA biogenesis [BR:
war03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYS32_04000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
GP4
PRTase-CE
Motif
Other DBs
NCBI-ProteinID:
QQG38738
LinkDB
All DBs
Position
641059..642399
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AA seq
446 aa
AA seq
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MEIEFIPVGGYGEVGKNMGLLRVGDEAVILDMGLFIPKAVSFEEEGGHRERASTLELIKY
GMIPDDRVIEKYKQEVKAIVLSHAHLDHIAATQYLAPHYPQAPVITTPFSMEVLKTTMSD
DNIKIPNQLKPLNLNHPLKISKNIEIELINMPHSTPQSSVVAVHTPKGTVLYGNDFKLDE
SPTLGQKGNVKRLKQLGKGNVIAAIVDALYAPIHSKTPSEAIAKSLLKNVMLGSENNHNA
LIATTFGSHLARLKSMIEFSRKLDRKVVFLGRSMKKYIDAGQKIGIINFAGTEVLGYSNM
VKRKVKKLSGKSLDKYTIICTGGQGESKAVLTKMVSGALEFKFQKEDSVIFSNKVIPTEP
NITSRKKLEEKLEAKKVRIFKDVHSSGHMAREDIRDFIKMTNPSIVIPAQGDHKMFSAFS
ELAENMGYKKNKNVFTPKDGEKLKIS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaattcatcccagtaggaggctatggagaagttggtaaaaacatgggtctc
ttgagagttggtgatgaagcagttattctcgatatgggtttatttattcctaaagcagtt
agttttgaagaagaaggaggtcatagagagcgtgcttctacattagaattgataaaatat
ggtatgattccagatgatagagtaattgaaaaatacaagcaagaagtaaaggcaattgtt
ttgtctcatgctcacttagaccacattgctgcaactcaatatttagctccgcattatcct
caagcgcctgtaattacaactccatttagcatggaagtactaaaaacaactatgagtgat
gataacattaaaatcccaaaccagttaaagccattaaatcttaatcatcctcttaagata
tcaaaaaacattgaaatagagttaattaatatgcctcattctactccacaaagctctgtt
gttgctgttcatactccaaaaggaacagttctttatggaaatgatttcaaactagatgaa
tcgcctactttaggacaaaaaggtaatgttaaaagattgaaacagcttggcaagggaaat
gttattgctgcaattgtagacgctttgtatgcaccaattcattcaaaaactccttctgaa
gctattgcaaaatcattattaaaaaatgttatgttaggttctgaaaataatcataatgca
cttattgcaacaacatttggatctcatctggcacgtttaaagtctatgattgaattctca
agaaaattagacagaaaagtagtctttttgggaagaagtatgaaaaaatatatcgatgct
ggccaaaaaatagggataattaattttgcaggaacagaggttttaggttatagcaatatg
gtaaaaagaaaagttaagaaattgtcaggaaaaagcttggataaatatactataatatgc
acgggtgggcaaggggagtcaaaagctgttttaaccaaaatggtttcaggtgctttagag
ttcaagttccaaaaagaggatagtgttattttttcaaataaagtcattccaacagaacca
aatattacttcaagaaaaaaattagaagaaaagcttgaagcaaaaaaagtcagaattttt
aaggatgtccatagttctggccacatggcacgtgaagatatcagggattttataaaaatg
acaaatccttctattgtcattccagctcaaggagatcataaaatgttcagcgcattttca
gaattagctgaaaatatgggatataaaaaaaataaaaatgtttttactccaaaagatgga
gaaaagctaaagatttcttaa
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