Wolffia australiana: 11030534
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Entry
11030534 CDS
T11932
Symbol
rpoB
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
wau Wolffia australiana
Pathway
wau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
11030534 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wau03021
]
11030534 (rpoB)
03400 DNA repair and recombination proteins [BR:
wau03400
]
11030534 (rpoB)
Enzymes [BR:
wau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
11030534 (rpoB)
Transcription machinery [BR:
wau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
11030534 (rpoB)
DNA repair and recombination proteins [BR:
wau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
11030534 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
11030534
NCBI-ProteinID:
YP_004769939
UniProt:
G1FBQ8
LinkDB
All DBs
Position
Pltd:complement(25113..28331)
Genome browser
AA seq
1072 aa
AA seq
DB search
MLRDGNEGMFTIPGFSQIQFEGFCRFINQGLMEEFNKFPKIEDTDQEIEFKLFVETYQLA
EPLRKERDAVYESLTYSSELYVLAGLIWKTNRDMKEQTVFIGNIPIMNSLGTFIVNGIYR
IVINQILQSPGIYYRSELDHNGISVYTSTIISDWGGRLELEIDRKARIWARVSRKQKISI
LVLLSAMGLNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFS
ESLCKELQKKFFQQRCELGRIGRRNINQRLNLDIPENNTFLLPRDVLAAADHLIGMKFGM
GTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTISGAIRHKLIPTPQNLVTSTS
LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGVTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHVRIGHWGSIETPFYEISERSKEKEARMVYLSPSRDEYYM
IAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHND
ANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSVIAEHEGKVISTDTHQIVFS
GNGNTLTIPLVMYERSNKNTCMHQKPQVQRGKYVKKGQILADGAATVGGELALGKNVLVA
YMPWEGYNFEDAVLISERLVYSDIYTSFHIRKYEIQTHMTSQGPERITNEIPHLEAHLLR
NLDRNGIVLLGSWVETGDILVGKLTPQIANESSYAPEDRLLRAILGIQVSTAKETSLKLP
IGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQD
MPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLNRHYRIAPFDERYEQEASRK
LVFSELYEASKQTKNPWVFEPEYPGKSKIFDGRTGDPFEQPVLIGRSYILKLIHQVDDKI
HGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE
VLGTTIIGGTIVTPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcgatggaaatgagggaatgttcacaatacctggatttagtcagatacaattt
gagggattttgtaggtttattaatcagggtttaatggaagaatttaataagtttccaaaa
attgaagatacagatcaagaaattgaatttaaattatttgtggaaacatatcaattggca
gaacccttgagaaaagaaagagatgctgtgtatgaatcactcacatattcgtctgaatta
tatgtccttgcgggattaatttggaaaaccaatagagatatgaaagaacaaacagtattt
attggaaacattcctataatgaattccctcggaacctttatcgtaaatggaatttacaga
attgtaattaatcaaatattgcaaagtcctggtatttattaccgttctgaattggaccat
aacggcatctcggtctataccagcaccataatatcagattggggaggcagattagaatta
gaaattgatagaaaagcaaggatctgggcccgtgtaagtagaaaacaaaaaatctccatt
ctcgttctattatcagctatgggtttaaatctaagagaaattctagataatgtttgttat
cctgaaattttcttgtctttcctaaatgataaggaaaaaaaaaagatcgggtcaaaagaa
aatgctattttggagttttatcaacaatttgcttgtgtaggtggggatccagtattttct
gagtccttgtgtaaggaattacaaaagaaattttttcaacaaagatgtgaattaggaaga
attgggcggcgaaatatcaaccaaagattaaatcttgatatacctgagaacaatacattt
ttgttaccacgagatgtattggctgctgcagatcatttgattggaatgaaatttggaatg
ggtacacttgacgatatgaatcacttgaaaaataaacgtattcgttctgtagcagatctg
ttgcaggatcaattcggactggctcttggtcgtttagaaaatgcggttcgaggaactata
tctggagcaatcaggcataaattgataccaactcctcaaaatttggtaacttcaacttca
ttaacaaccacttatgaatcatttttcggtctacaccctttatctcaagttttggatcga
actaatccattaacccaaattgttcatggtcgaaaattgagttatttaggtcctggaggg
gtgacaggtcgaactgcaagttttcggatacgagatatccaccctagtcactatggacgt
atttgcccaattgacacctccgaaggaattaatgttggacttattggatccttagctatt
catgtaaggattggtcattggggatccatagagactccattttatgaaatctctgagaga
tcaaaagaaaaagaagcacggatggtttatttatcaccaagtagagatgaatattatatg
atagcggcaggcaattctttggccttaaatcgaggtattcaggaagaacaggttgttcct
gctcgataccgtcaagaattcctgactattgcctgggaacaggttcatcttcgaagcatt
tttccctttcaatatttttcgattggagcctctctcattccttttattgagcataatgat
gccaatagggcgttaatgagttctaatatgcagcgtcaagcagttccgctttctcggtcc
gagaagtgcattgtaggaaccggactagaacgccaagcggctttagattcgggagtttca
gttatagccgaacatgagggtaaagttatttctacggatactcaccaaattgttttctca
ggtaatggaaacactctaactattccattagttatgtatgaacgttcgaacaaaaatact
tgtatgcaccaaaaacctcaggttcaacggggtaaatatgttaaaaagggacaaatttta
gccgacggggcggctaccgttgggggagaactcgctttgggaaaaaatgtattagtagct
tatatgccatgggaaggctacaattttgaagatgcggtacttataagtgagcgtttggtc
tatagcgatatttatacttcttttcacatccgaaaatatgaaattcaaactcatatgaca
agtcagggccctgaaagaattactaacgaaatacctcatttagaagctcatttactccgc
aatttagacagaaatggcatcgtgctgctcggatcttgggtggaaacaggtgatatttta
gtaggtaaattaacgcctcagatagcgaatgaatcgtcgtatgcaccagaggatagatta
ttacgagccatacttggtattcaggtttccactgcaaaggagacttctctaaaactacct
ataggtggaaggggtcgagtaattgatgtgagatggatccagaaaaaagggggttccagt
tataacccagaaatgattcgtgtatatatttcacagaaacgtgaaatcaaagtgggtgat
aaagtagcaggaagacatgggaataagggtattatttctaaaattttgcctagacaagac
atgccctatttacaagatggaactccggttgatatggtcttcaaccctttaggagtaccc
tcacgaatgaatgttggacagatatttgaatgttcgctcggcttagcgggagatctttta
aatagacattatagaatagccccttttgatgagagatacgagcaagaggcttcaagaaaa
ctagtgttttcagaattatatgaggcaagtaagcaaacaaaaaatccatgggtatttgaa
cccgaatatccaggaaaaagtaaaatatttgatggaagaactggagatccttttgaacaa
cctgtcctaataggcaggtcctatatacttaaattaattcatcaagttgatgataaaatc
catggacgttccagtggacattatgcacttgttacacaacaaccccttagaggaagggca
aaacaaggtggccaacgagtgggagaaatggaagtttgggctttagagggatttggcgtt
gctcatattttacaagagatgcttacttataaatcagatcatattagagctcgtcaggaa
gtacttggtactacgattattggaggaacaatagttactcctgaggatgccccagaatct
tttcgattgcttgttagagaactacgatctttggctctggaactgaatcattttcttgta
tctgagaaaaattttcagattaataggaaggaagcttga
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