KEGG   Wolffia australiana: 144700202
Entry
144700202         CDS       T11932                                 
Symbol
LOC144700202
Name
(RefSeq) pre-mRNA-processing factor 19-like
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
wau  Wolffia australiana
Pathway
wau03040  Spliceosome
wau04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:wau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    144700202 (LOC144700202)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    144700202 (LOC144700202)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:wau03041]
    144700202 (LOC144700202)
   04121 Ubiquitin system [BR:wau04121]
    144700202 (LOC144700202)
   03400 DNA repair and recombination proteins [BR:wau03400]
    144700202 (LOC144700202)
Enzymes [BR:wau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     144700202 (LOC144700202)
Spliceosome [BR:wau03041]
 Complex B
  Other components
   Prp19 complex
    144700202 (LOC144700202)
 Complex C
   Prp19-CDC5 complex
    144700202 (LOC144700202)
Ubiquitin system [BR:wau04121]
 Ubiquitin ligases (E3)
  U-box type E3
   144700202 (LOC144700202)
DNA repair and recombination proteins [BR:wau03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    144700202 (LOC144700202)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st DSE1_N WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_TEP1_C CFAP251_N Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_WDR41 WD40_like U-box Beta-prop_Aladin WDR90_beta-prop_4th PEP5_VPS11_N NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_VPS8 zf-Nse PAS_11 V_ATPase_I_N PUMA_CC
Other DBs
NCBI-GeneID: 144700202
NCBI-ProteinID: XP_078427765
LinkDB
Position
2:complement(24520569..24527975)
AA seq 523 aa
MLCAISGEVPEEPVVSKKSGLLFERRLIERHVLDSGKCPVTGEAISMDDIVPVKTNKTVK
PRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARTLLSEAERKIPVIPASETSAPITNGKRSIEDEEVGPDGKRIRPGITNDIIEELS
SCNTLLSSQRKKRQIPSTLTPIETLESFTQLSSHPLHKTSKPGILTIDIHPSKDVIATGG
VDATAVIFDRASGEILSTLTGHSKRVTTVKFVPRDDLFVTGSADKTIRLWQGANDGNYNC
LHVLKDHSAEVQAVTVHATHKYFVSASLDNTWCFYDIVSGRCHSQVGDPSANEGFTSASF
HPDGLILGTGTTQAAVKIWDVKSQSNVATFDGHVGSVTAVSFSENGYFLATAAADGVKLW
DLRKLRNFRSFAPYDSDTTTNSVEFDFSGSYLALSGSDIRLYQVANVKAEWNSIKTLPDL
SGSGKISCVKFGPDAKYLAVGSTEDRHLRIFGPAGMDGSEDTV
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgctgtgcgcaatctccggcgaggtgccggaggagccggttgtctccaagaaatctggg
cttctgttcgagaggcgtctcatcgagcgacacgttcttgattctggaaaatgtcctgtt
actggagaggctatctcgatggacgacattgtgcctgtgaagacgaacaagacggtgaag
cccaggcccttacaggctgccagtatccctggtttgcttgggatttttcagaatgaatgg
gatgcgttgatgctatccaactttgcattggagcagcagttgcatactgcaaggcaggag
ctgagtcatgctttatatcagcatgatgctgcatgtcgtgtgattgcacgtcttaagaaa
gagagggatgaagcaaggacgttgttatcagaagcagaacggaagatccctgtgattcca
gcatcagaaaccagtgcgcccattacaaatgggaaaagatctatcgaggatgaagaagtt
ggtcctgatggaaagagaattcggcctggcatcacaaacgatatcattgaggagctttcc
agctgcaacactcttctttcatcacaacggaaaaagcgccagattccgtcaacgcttaca
cctattgaaactcttgagagctttactcaactttcaagtcatcctctccacaaaactagc
aaacccgggatactgaccattgatattcatccttctaaggatgttattgcaactggcgga
gttgatgccactgctgtaatatttgatcgggcatcgggagagatattgtccactctcact
ggacattcaaagcgggtgactactgtcaaatttgtaccgcgggacgacttgtttgtgact
gggtcagctgataagaccattcgtttatggcaaggcgcaaatgatgggaactacaactgc
ttgcacgtattgaaggatcattcagctgaggttcaagcagtgacggtccatgctacccac
aaatactttgtctccgcttcgcttgacaacacatggtgtttctatgatatcgtatcagga
cgctgccattcccaagttggtgatccctcagccaacgaagggtttacgtcggcgtcattc
caccctgatggtctaatcctcgggacaggaacgacccaagctgcggtcaagatctgggat
gtgaaaagtcagtccaacgtggctaccttcgatgggcatgttgggtcagtgaccgccgtt
tcattctccgagaacggttacttccttgcgacagcggctgctgatggggtgaagctttgg
gatcttcggaagttgagaaactttagatcttttgccccatacgactctgacacgacaact
aattcagttgaattcgacttcagtggaagctacctcgcactctccggctctgacataagg
ctttatcaagtggcaaacgtgaaggctgaatggaattccatcaagacccttcctgattta
tcaggctcaggcaagataagctgtgttaagttcgggccagatgcgaagtacctggcggtg
ggttcgactgaggaccgacacctgcgcatcttcgggccagccgggatggatggttcagag
gataccgtgtaa

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