Candidatus Woesebacteria bacterium GW2011_GWF1_31_35: UR17_C0001G0242
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Entry
UR17_C0001G0242 CDS
T04464
Name
(GenBank) ATP-dependent DNA helicase PcrA, DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wba
Candidatus Woesebacteria bacterium GW2011_GWF1_31_35
Pathway
wba03420
Nucleotide excision repair
wba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UR17_C0001G0242
03430 Mismatch repair
UR17_C0001G0242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wba03400
]
UR17_C0001G0242
Enzymes [BR:
wba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UR17_C0001G0242
DNA repair and recombination proteins [BR:
wba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UR17_C0001G0242
MMR (mismatch excision repair)
Other MMR factors
UR17_C0001G0242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKM83050
LinkDB
All DBs
Position
216425..218278
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AA seq
617 aa
AA seq
DB search
MTINLSELNKEQLRAVTYTSGPLLVLAGAGSGKTKCLTYRVAFFISKLKVLPENVLLTTF
TNKAAKEMKERMNVLLNEAGLPTDSVQSLQAGTFHSFCAKVLRIDGEEIGIFPNFLIYDE
SDQKDLVKEIINELGLKESTKPSSILYAISEAKNQMLNPDAYFEIARGDIAQTVFQVYKL
YEKRLKEINALDFDDLLLKTVKLFEVPKVINKWKERITQIFVDEWQDTNKIQYRLIKLLD
GKRGCITAVGDASQSIYSWRGADFRNINYLIKDYPTIKIINLEQNYRSTQNILDAANSVI
LKNTSHPILRLWTEKSGGEKIVLYPARNGFDEADFVVKQINKLIKNVKYSDIAILYRTNA
QSRVLEEAFLHAAIPYTLVGGVRFYDRKEIKDILCYLRLLFNPKDSVSEKRAVALGKRRY
ESFKEIRDIDKKTTLEILDEIIQKTEYLTKFKEDDPEDLPRLENIKELRSVALEFPELLE
FLENVSLVEAGPINENGNAVTLMTLHSAKGLEFPVVFIVGMEEGLFPHSRALWEKEQLEE
ERRLAYVGITRAKDTLFLTYASKRLYFGEKISNPPSRFISDIPEHLLDGKIIRFEEERVE
ISNDDLNFDDILDKYLK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaatttatcagagcttaataaagaacaattaagagcagtaacttacaccagc
ggacccctactggtccttgctggagccggaagtggaaaaacaaaatgtctaacatatcgg
gtagctttttttatatctaagctaaaagtacttcctgaaaatgttttattaaccaccttt
actaacaaagcagccaaagaaatgaaagaaagaatgaatgttcttttaaacgaagcaggg
ctacctactgattcggttcaatcattacaagctggtacgtttcattcattttgcgcaaaa
gttctaagaattgatggagaagaaataggaatttttccaaattttttaatatatgatgaa
tcggatcaaaaagatttggttaaagaaattattaatgaattaggattaaaggaaagtact
aaaccttcttcaattttatatgctatttctgaagcaaaaaaccagatgcttaacccagat
gcctattttgaaatagcaaggggagatatagcccaaacagtttttcaagtttataaatta
tatgaaaaacgccttaaagaaataaatgccttggattttgatgatttacttttaaaaaca
gtaaaactttttgaagttcccaaagttattaataaatggaaagagagaataacccaaatt
tttgttgatgaatggcaagatactaataaaattcaatatagattaattaaattattagat
ggaaaaagaggttgtattacagctgtgggagatgcatctcaaagtatttattcatggagg
ggagcagattttagaaatattaattatttaataaaagattatcctactataaagattatt
aatcttgaacaaaactatagatcaacacaaaatattttagatgctgcaaattcagttata
cttaaaaatacctcacatccaatattgaggctttggacagaaaaaagcggtggagaaaaa
attgtactttatcctgccagaaatgggtttgacgaagcagattttgtagtaaaacaaata
aataaactcattaaaaacgtaaaatattctgatattgcgattctttacagaactaacgct
caatcccgtgttctagaagaagcctttcttcatgcggcaattccatataccttagtaggg
ggagtaagattttatgacagaaaagaaattaaagacatactttgctacttaagacttttg
tttaatccaaaagattcagtttcagagaaaagagccgtggcactaggaaaaagaagatat
gaaagttttaaagaaattagagatattgataaaaaaacaactttagaaatattagatgaa
attattcaaaaaactgagtatttaacaaaatttaaagaagatgacccagaggatttgcca
agacttgaaaacattaaagaattaaggtctgttgcgttagaatttcctgaacttttagaa
tttttagaaaatgtatctttagttgaagctggtccaattaatgaaaatggtaatgcggtt
actttaatgaccctacattctgctaaggggttagaatttcctgttgtttttattgttggc
atggaagaaggacttttccctcattcaagagctctttgggagaaagaacaacttgaagag
gaaagacgtttagcctacgttggtataacaagagctaaagatacactttttttaacatat
gccagtaaacgactttactttggagaaaaaatcagtaatcctccttcaagatttatttca
gacatcccagaacatttattagatggaaaaataataaggtttgaggaagaaagggtagaa
atatcaaatgatgaccttaactttgatgatatattggataaatatttaaaatga
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