Candidatus Woesebacteria bacterium GW2011_GWF1_31_35: UR17_C0001G0247
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Entry
UR17_C0001G0247 CDS
T04464
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wba
Candidatus Woesebacteria bacterium GW2011_GWF1_31_35
Pathway
wba03420
Nucleotide excision repair
wba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UR17_C0001G0247
03430 Mismatch repair
UR17_C0001G0247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wba03400
]
UR17_C0001G0247
Enzymes [BR:
wba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UR17_C0001G0247
DNA repair and recombination proteins [BR:
wba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UR17_C0001G0247
MMR (mismatch excision repair)
Other MMR factors
UR17_C0001G0247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF2800
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKM83055
LinkDB
All DBs
Position
complement(220768..223680)
Genome browser
AA seq
970 aa
AA seq
DB search
MGIQDKKLNKEQLQAINHKDGPLLIIAGAGTGKTTVITERVKNLILKDLAKPEEILALTF
TEKAAKEMEERIDLALPYGYTQMWVMTFHSFCDRVLRDNAIHIGLDPKFKLMTEATSIQF
IRTNLFEFDLDYFRPLGNPNKFIQGMLNHFSRLQDENITPTEYLIWAKSKVKSKSTKVSE
EEKLEIQKTLELSNAYKKYDELKINKSMFDFGDLITKTLELFNKRPNVLRQYQEKFKYIL
VDEFQDTNYAQNELTILLSGKRQNITVVADDDQAIYRWRGAAVSNVIQFRSNFPKTEIIV
LTKNYRSTQEILNRSYSLIQHNNPDRLEVVEKIEKKLVAIKKGGNQKLKFIHADRVENEA
DLVSEEIIKLVKKKTNKLTYKDFAILIRANNHADPFIRAFERKGIHHQFLGPAKLFKQDE
IIDLISYFKVLYNLEDSESFYRLLSIELFDINPLDLIKIGNLARKKNKSFFDACGKLDQL
ELRKDTKEKIEKIVILINKHLGIINKQTAGEILYDFLLSSGLLQNLLNPKDSDGEKKAKN
IAKFFDKIKSYEVDHEKVGVNQIVDWIELLQELGESPLATDTDWTENDAVNILTIHSSKG
LEFPVVFLVNLVAQRFPSTERKEQIPIPEELIKEVLPQGDFHLQEERRLFYVGMTRAKER
LFLTAADYYGEGKREKKLSPFIFEALEDLKLNDSKLKKNNKNIDFSDNKRSEQVNLPINN
KLLDINYLSYSQIETFKTCPMHYKLRYIYKIPTPTSASISFGISIHSTFNEFYRKVKDGA
KPTEKLICEILKNNWIDDGFSSKEHERKFFEKGKVYLSGFLKESFNPKKLPILLEQKFTI
PLDKTLKIGGTIDRIDQLKDGSLEIMDYKTGATIPTQKEVDNNLQLSFYALAATKILSKP
FNRKPEEIKLSLYYLDSQEKITTTRTQKDLDKATQEIFKVRDEICKSDFKCSNHFFCQGK
CEYSMFCKSE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
gtgggtatacaagataaaaaactaaacaaagaacaacttcaagcaattaatcacaaagat
ggtccgcttttaatcattgcaggggcagggactgggaaaactactgtaataacagaaaga
gttaaaaatttaatattaaaagatcttgcaaaacctgaagagatacttgctttaactttt
actgaaaaagctgctaaagaaatggaagaaagaattgatttagcacttccatatggttat
acacagatgtgggtgatgacattccattccttttgcgacagagttttaagagataacgca
attcacataggacttgaccctaaatttaagttaatgacggaggctacctcaattcaattt
attagaactaacttatttgaatttgatttagattattttagacctttaggaaatcccaac
aaatttatacaaggaatgttgaatcatttttcaagacttcaagatgagaatattactccc
acagaataccttatttgggcgaaatctaaagttaaatcaaaaagtacaaaagtttctgag
gaagaaaaactagaaatacaaaaaaccttagaactttctaatgcttacaaaaaatatgat
gaattaaaaataaataaaagtatgtttgatttcggagatttaataactaaaaccttagaa
ttatttaacaaaagaccaaatgttttaaggcaatatcaggaaaagtttaaatatattttg
gttgatgaatttcaagatactaattatgctcaaaatgaattaacaatattactttccgga
aagagacaaaatattactgttgttgctgatgatgatcaagccatttatcgttggagaggg
gctgctgtttcaaatgtcatacaatttagatcaaattttccaaaaacagaaataattgtt
ttaactaaaaattatagaagcacccaggaaatcttaaatagaagttatagtttaattcaa
cataataatcccgatagacttgaggttgttgaaaaaattgaaaaaaaacttgtagctatt
aaaaaagggggaaatcaaaaattgaagtttattcatgcagatagagttgaaaatgaagca
gacttggtttctgaagaaataatcaaattagtaaaaaagaaaactaacaaattaacatat
aaagattttgcaatattaataagagctaataatcatgcagacccatttatcagggctttt
gaaagaaaaggtatccatcatcagtttttaggtcctgcaaaattatttaaacaggatgaa
attatcgatctaatttcttactttaaagtactttataatcttgaagattcggaatctttt
tatagactattatctattgaattatttgacattaacccattagacttaataaaaatcgga
aacttggcaagaaagaaaaataagtctttttttgatgcatgtgggaaattagatcaatta
gagttaagaaaagacactaaagaaaagatcgaaaaaatagttattttaattaataaacac
ttaggaataataaataaacaaacagctggcgagattttatatgattttttactttcttca
gggcttttgcaaaatctattaaatccgaaggactctgatggggaaaagaaagctaaaaat
attgctaaattttttgacaaaataaaatcatatgaagtagatcatgaaaaagttggtgtt
aaccaaattgttgactggattgaactcttacaagaactaggagagtcacctttagcaact
gacactgattggacagaaaatgacgcagttaatattttaacgatacattcttccaaggga
ttggagtttcctgttgtgtttttggttaacctagttgctcaaagatttccatcgactgaa
agaaaagagcaaattccaattcctgaagaattgataaaagaagttttacctcaaggtgat
tttcatttacaggaagaaagaagacttttctatgttggcatgacaagagctaaagaaagg
ctttttctaactgcagccgattattatggagaagggaaaagagagaagaaattatcccca
tttatatttgaggcattagaagatttaaaattaaatgactcaaaattaaagaaaaataat
aaaaatatagatttttcagataataaaagaagtgaacaggttaatttacctataaataat
aaattattagatattaattatttatcttattctcaaattgaaacttttaaaacctgccca
atgcattataaattaaggtatatctataaaattccaacaccgacttcagcatcaattagt
tttggaataagtattcactcgacatttaatgaattttatagaaaagttaaagatggagct
aaacccactgaaaaattaatttgtgaaattttaaaaaataattggattgatgatgggttt
agttcgaaagaacacgaaagaaaattttttgaaaaaggaaaggtatatttatcaggattt
ttgaaagaatcttttaaccccaaaaaattgccaatattattagagcaaaaatttacaatt
cccttggataaaacattaaaaataggaggaacaatagatagaatagatcaattaaaagat
ggaagtctggaaattatggattataaaacaggagctacgattccaactcaaaaggaagtt
gataataatttgcaactttccttttacgcattagctgcaacaaaaatattatcaaaacca
tttaacagaaaaccagaagaaataaaattgtctctttactacttagatagccaagaaaaa
attactacaactagaacacaaaaagatttagataaagctactcaagaaatatttaaagta
cgggatgaaatttgtaaatcagattttaaatgtagtaatcattttttctgtcaaggaaaa
tgtgaatattcaatgttttgtaaaagtgaataa
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