Candidatus Woesebacteria bacterium GW2011_GWF1_31_35: UR17_C0001G0571
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Entry
UR17_C0001G0571 CDS
T04464
Name
(GenBank) topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wba
Candidatus Woesebacteria bacterium GW2011_GWF1_31_35
Brite
KEGG Orthology (KO) [BR:
wba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wba03032
]
UR17_C0001G0571
03400 DNA repair and recombination proteins [BR:
wba03400
]
UR17_C0001G0571
Enzymes [BR:
wba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UR17_C0001G0571
DNA replication proteins [BR:
wba03032
]
Prokaryotic type
DNA Topoisomerases
UR17_C0001G0571
DNA repair and recombination proteins [BR:
wba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UR17_C0001G0571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AKM83355
LinkDB
All DBs
Position
502664..504571
Genome browser
AA seq
635 aa
AA seq
DB search
MQLIIVESPTKAKTLSRFLGSEFEVDSTRGHIKDLPKSILGVDIENDFKPDYVPVEKKKE
VIASLKKKAKLAKIVYIATDPDREGEAIAGHVAEILSKSKLVRITFHEITKEAVKEAISR
PGKVNENLVNAQISRRVLDRLVGYKISPLLWKKVRRGLSAGRVQSVAVRLIVERENEIKA
FKTEEYWEVFAKFKDFTAGLINEKITNKVKADEILANLEKADYKVFDVKKREVKSNAYAP
FTTSTMTQAGARIFGWSAKRTMNVAQRLYEEGLITYHRTDSMNLSIDAVNKARNFISKEY
GQKYLPEKALVYKTKSKSAQEAHEAIRPTNIEQINEAVGLIPDEKKLYELIWKRFIACQM
NPAIYSETTIDVEAKHKEGVHMLRASGQIMIFDGWRKLFMVDKEIIILPNLTIGESLVKE
KVWSEQKFTLAPARFNEASLIKILEKLGIGRPSTYAPIISTIQIRSYVEKKEGKFFPTTI
GFAVTEFLVKNFPIEMDFGFTAEMEENLDKIADGKIKWVELMKKFWKPFEKTLKSVEKNA
ERVKIETEKLGKACPDCKDGELVIRVGRFGKFISCSKFPDCKHTEKFLDKIGMKCPDCKE
GDVIIKKSKKGNFFGCSKYPDCKFASWKKPIEEKS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaataatagttgaaagtcctacaaaagcaaaaacgctttcaagatttcttgga
agtgagtttgaagtggattcaacaagggggcatataaaagatttgccaaaaagtatatta
ggagttgatatcgaaaatgattttaaacctgattacgttcctgttgaaaagaaaaaagaa
gtaattgcttctttaaagaaaaaggcaaaacttgcaaaaattgtctatattgcaactgat
cctgatagagaaggagaggcaattgcgggtcatgttgcagaaatactttcaaaatccaag
ctagtaaggattacctttcatgaaattactaaagaagcagtaaaagaagcaatctcacgt
cctggaaaagtaaatgaaaatttggtaaatgctcaaatctcaagaagagtacttgatagg
ttagtaggttataaaatatctccacttctttggaaaaaagtaagaagaggtttatcagca
ggaagggtccaatcagttgccgtgaggttaattgttgaaagagaaaatgaaataaaggca
tttaaaacggaagaatattgggaagtatttgctaaatttaaagattttacagctggatta
ataaatgaaaagataacaaataaagttaaagcagatgaaatacttgccaatttagaaaag
gcagattataaagttttcgatgttaagaaaagagaagttaaaagtaatgcttatgctcct
tttacaacctcaacaatgactcaagccggagctagaatttttggttggtctgcaaaaaga
acaatgaatgtagctcaaaggttatatgaggaagggttaattacatatcacagaactgat
tcaatgaatctttcaattgatgcagttaataaagctagaaattttatctcaaaagaatat
ggacaaaaatatttacctgaaaaggctttagtttataaaaccaaatcaaaatcagctcaa
gaagctcatgaagctataagacctacaaatattgaacaaattaatgaagctgttggctta
attcctgacgagaaaaaactatatgagttaatttggaaaagatttatagcctgtcagatg
aatcctgccatctattctgaaacaacaattgatgtcgaagcaaaacataaagaaggggtt
catatgttaagagcatcgggtcaaattatgatttttgatggttggagaaaattatttatg
gttgataaggagataatcatcttacctaatttaacgattggcgaatctctggtaaaagaa
aaggtttggagtgaacagaaatttactttagccccagctagatttaacgaagcttcttta
attaagatattggaaaaattgggtatcggtagaccttcaacatacgctccaattatttct
acaatccaaataagaagttatgttgagaaaaaggaagggaagttttttccaacaacaatt
ggttttgctgtaacagaatttttagttaaaaatttcccaatagaaatggattttggtttt
actgcagaaatggaagaaaatttagataaaattgcagatggaaaaattaaatgggtagaa
cttatgaaaaagttttggaaaccttttgaaaagacattaaaaagtgttgaaaaaaatgca
gagagagtaaaaatagaaacagaaaaattagggaaagcctgtcccgattgtaaagacgga
gaattagttataagagttggaagatttggaaagtttataagttgttctaaatttccagat
tgcaaacatacagagaaatttttagataaaattggtatgaagtgtcctgattgcaaagaa
ggagatgtaattattaagaaatctaagaagggaaatttctttggatgcagtaagtatcca
gattgtaaatttgccagttggaaaaaacctattgaagaaaaaagttaa
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