Wolbachia endosymbiont strain TRS of Brugia malayi: Wbm0019
Help
Entry
Wbm0019 CDS
T00234
Name
(GenBank) Polyribonucleotide nucleotidyltransferase, pnp
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
wbm
Wolbachia endosymbiont strain TRS of Brugia malayi
Pathway
wbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Wbm0019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wbm03019
]
Wbm0019
03016 Transfer RNA biogenesis [BR:
wbm03016
]
Wbm0019
Enzymes [BR:
wbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Wbm0019
Messenger RNA biogenesis [BR:
wbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Wbm0019
Transfer RNA biogenesis [BR:
wbm03016
]
Prokaryotic type
tRNA degradation factors
Wbm0019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_NusA_2nd
KH_2
OB_PDCD11
Perilipin_2
Spt6_S1
DUF2115
Motif
Other DBs
NCBI-ProteinID:
AAW70611
UniProt:
Q5GTR3
LinkDB
All DBs
Position
complement(25805..28072)
Genome browser
AA seq
755 aa
AA seq
DB search
MFEIIKKSIEWGGRTLSLETGKIARQADGSVVVNYGDTSILVTVVRKKKEEIVDFLPLNV
QFIAKSYAMGRIPGGFFKREGKPSDRETLISRVIDRSIRPLFLEGFHDEISIVCNLLTYD
TVNPPEVPALIGAVAALAISGVPFHFIIAGVLVGCDGNNNYILNPSVQEMKVSSLDLFLS
GDERSILMVESEAKELPEENILNAIKFGHEHLQPVIKLIKEFADTIGNKFDSFAPIDISD
IMQDLEKHSKDFEEAYSQTVKQERAQTLETIRNNILNPLKEAGKDEKLITQAVKNFERSL
LRKIIREKGTRIDGRKYDEIRQIEVEVDILSRTHGSALFTRGSTQALVVTALGTTQDEQI
VDDIEGDRREHFMLHYNFPSFAVGDASAIRAPGRREIGHGKLAWKAIHPVLPDKSEFPYT
IRVVSEIMESDGSSSMATVCGTSLALMDTGVPIKSPVAGIAMGLIKDKNDYVILSDILGD
EDYLGDMDFKVAGTSEGITALQMDMKISGISFEIVEKSLEQAKAGRLHILEKMNSVISEH
SDDVKGHAPRMVSFYIDKDKISAAIGAKGKNIRSVCERSNAKIEIGDDGKVSVFAMSSAE
AEIAKNMMIDSITELEQGAIVDVKVVKIDKSIVELELFNGRKGKMHISEVANQHIESIES
ILKQGDTFKALVIDFEKGGCPKLSRRRVDQETGDFFEGELYNEEKKDSSNDRDYYNSPFN
RKSGHRKRPVHSRSSFSNRNNRPKFGNDDSSSSFY
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaattataaagaaatctatagaatggggtggtcgtaccttatctttagaaaca
ggaaaaatagcacgtcaagctgatggctcagttgttgtaaattatggtgacacttctatt
ttagtaactgttgtacgtaaaaagaaggaagaaatcgttgatttcttgcctttaaatgtg
caatttatcgcaaaaagctatgctatgggtaggattcctggtggctttttcaaaagagaa
ggcaagccatctgatagagaaaccttgatttcaagagtaatagatagaagtataagacca
ctatttttagaaggtttccatgatgaaatcagtatagtgtgcaatttattaacttatgat
acagttaaccctcctgaagtgccagcattgattggtgctgttgcagctctcgcaatctcc
ggtgttccttttcactttattatagctggagttttagttggatgtgatggaaataataac
tatatactcaacccttctgttcaagagatgaaagtcagcagtttagatctgtttttatct
ggtgatgagcgttcaattttgatggttgaatcagaggcgaaagagctccctgaagaaaat
attttgaacgcaataaaatttggccatgaacaccttcaacctgttattaagctcataaaa
gagtttgctgacacaattggcaataaattcgatagtttcgctcctatcgacatatcagac
ataatgcaagatcttgaaaagcacagtaaagattttgaagaagcatattcacaaacagta
aaacaagagcgagctcaaactttagaaacgatcagaaataatatattgaatcctctcaag
gaagctggaaaagatgagaaattaattacacaagcggtaaaaaactttgaaaggtcttta
ctgcgtaaaataattagagagaaaggtacaaggatagatggtcgtaagtatgatgaaata
cgtcaaatagaagttgaagttgatattctatctagaactcatgggtctgcactatttacg
agaggtagtactcaggcattggttgttactgctcttggtactacacaagatgagcaaatt
gtagatgacattgaaggggatagacgtgaacattttatgttacattataattttccttca
tttgccgttggagatgcttctgccatacgcgcaccaggaagaagagaaattggtcatggt
aaacttgcttggaaagcaattcatcctgttttacctgataaatctgaatttccttataca
ataagagtagtatctgaaatcatggaatcagacggctcttcttctatggcaacagtttgt
ggaacttccctcgcgttaatggatacaggcgtaccaataaagtctcctgtcgctggaatt
gctatgggcctcattaaagataaaaacgattatgtaatactttccgacatattaggtgat
gaagattatcttggtgacatggattttaaagtagcaggaaccagtgaaggaatcacggca
ctacaaatggacatgaaaatttccggtataagtttcgaaattgttgaaaaatctttagaa
caagcaaaagctggaagattacatatcttagaaaaaatgaattcagtgatttcagaacat
agtgatgacgtgaagggtcacgcgccaagaatggtatcattttacatagataaagataaa
atttctgcagctattggtgctaaagggaaaaatatacgcagtgtatgtgaaagaagtaat
gcaaaaattgaaataggagatgatggtaaagtttctgtatttgccatgagtagtgctgaa
gctgaaattgcaaaaaatatgatgatcgactcaatcacagaattagagcaaggtgctata
gttgatgttaaggttgtaaaaatagataagtctattgtagaacttgagcttttcaatgga
agaaaaggaaaaatgcacataagtgaagtagccaatcagcacatagaatctattgagagc
atacttaaacagggtgacacttttaaagcattggtgattgattttgaaaaaggtgggtgc
ccaaaactgtcaagacgccgcgttgatcaagaaacaggtgatttttttgaaggcgagctt
tataacgaagaaaagaaagatagttcaaacgacagggattattataatagtccatttaat
agaaaatctgggcaccgcaagaggcctgttcattctcgttctagcttcagtaataggaat
aatagaccaaaatttggtaatgatgactcatcatcaagtttttattaa
DBGET
integrated database retrieval system
