Wolbachia endosymbiont strain TRS of Brugia malayi: Wbm0318
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Entry
Wbm0318 CDS
T00234
Name
(GenBank) DNA-directed RNA polymerase alpha subunit/40 kD subunit, RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wbm
Wolbachia endosymbiont strain TRS of Brugia malayi
Pathway
wbm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wbm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Wbm0318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wbm03021
]
Wbm0318
03400 DNA repair and recombination proteins [BR:
wbm03400
]
Wbm0318
Enzymes [BR:
wbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Wbm0318
Transcription machinery [BR:
wbm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Wbm0318
DNA repair and recombination proteins [BR:
wbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Wbm0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AAW70907
UniProt:
Q5GSW7
LinkDB
All DBs
Position
complement(417990..419057)
Genome browser
AA seq
355 aa
AA seq
DB search
MYYDDGIPVFDSLDKLTKPNSMKVVSSDSSEKGDIVLEPLESGFALTLGNALRRVMLSSL
IGSAVYGIKIDGITHEFTSIQGVREDVTDIVLNMGMLRCKLNGTSNKCLSLSAKGPCQVL
AGMIETDDQCSIVNKDLLICTLGQDVELNMTIYVASGKGYLPVTKYKENEFLKPMNEQDL
ISFIPVNALYSPINRVSYRVENSRVGQVTDKDKLILSVETDGTISPSQAVDSAARILQEQ
LQPFISSDISYKKSQVSSPSGYKDLGYDPILLRKVDEMELSVRSHNCLKNENITYIGDLV
QKTESEMLRTANFGRKSLNEIKAVLNNFGLSLGMDIPDWPPKDIDELARQHTDED
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtattatgacgacggtattcctgtttttgacagtttagataaattaactaagcctaat
tcaatgaaagtagtatcaagtgactcaagtgaaaagggtgatatagtgctagaaccattg
gaaagtggttttgctttaacattaggtaatgcattaaggcgtgtaatgttgtcttctctt
ataggtagtgctgtttatgggataaaaattgatggtataactcatgaatttacttcaatt
caaggagtaagagaagatgtgactgatatagtattgaatatgggtatgttgaggtgtaaa
ttaaatggcacttctaataaatgcctaagcttgagtgctaaagggccttgtcaggtatta
gctgggatgatagaaactgatgatcagtgctctattgttaataaagatctgctgatatgt
acactgggacaggatgtagagctcaacatgactatatatgtggctagcggaaaaggttac
cttcccgtaactaaatataaggaaaatgaatttttgaagcctatgaatgagcaggatcta
attagttttattccggttaatgctttatatagtcctataaacagagtttcgtatagagta
gaaaatagtcgtgttggtcaagttactgataaggataaattgatattgtcagttgaaact
gatggtacaatttctccgagtcaagctgttgactctgctgcaaggatattgcaggagcaa
cttcagccttttattagctctgatataagttataaaaaatcacaggtttcttcgcctagt
ggttataaagatttgggttatgaccctatcttattgcgtaaagtagatgaaatggagtta
tctgtcaggtctcataattgcttaaagaatgaaaatattacttatataggtgatcttgta
caaaagacagaaagtgaaatgttaagaactgctaattttgggagaaagtctttaaatgaa
attaaggcggttttaaataattttggcttatctttgggtatggatataccagattggcca
cctaaggacatagatgaattggctaggcaacatactgatgaagattag
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