Wolbachia endosymbiont strain TRS of Brugia malayi: Wbm0469
Help
Entry
Wbm0469 CDS
T00234
Name
(GenBank) Predicted hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wbm
Wolbachia endosymbiont strain TRS of Brugia malayi
Pathway
wbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Wbm0469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wbm03019
]
Wbm0469
Messenger RNA biogenesis [BR:
wbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Wbm0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
AAW71057
UniProt:
Q5GSG7
LinkDB
All DBs
Position
complement(611489..613123)
Genome browser
AA seq
544 aa
AA seq
DB search
MNINKNEFLFLPLGGVGRIGMNVNLYHYRGKWIMIDLGIGFADETMPGIELLIADVSFIA
QRKKDLLGIIITHAHEDHCGAVPYLWKELQCPIYTTKFTANFLKEKLKEFRLEGMVSVKE
VDINGSINLSPFTVEFINVTHSIPEAHSILVSTDVGSALHTGDWKFDQKPIVGLTSNISR
LKEIGDKGNLLAAICDSTNVLGKHNPESESEIYNNIYNIIRRSKKLVAVSLFASNVARIE
TIGQVAKVLGRKVVLLGRSLWRIVRVAQNSGYLTDSVEFCEVKDVADLPREKLLLICTGC
QGEPMAAISKLANKSHHAFKMQQGDTVIFSSKIIPGNETRAHVIFNAFIEMGVEIVTEKT
ECVHASGHPVKAELREMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVEKAIMIAPGDIV
NLENGKKVDSINVNYFGVDGILLRHPGSNVIRMRKKMRDAGTIVVTAIVNKRNKLLAKPK
VFAPGVLEAVEDAAIIQRIIKAVESAFNLQSTKKVRNKIESLIFSILKEYLLKRPIIEVQ
IEQV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaacaaaaacgaatttttatttcttccacttggaggggtaggcaggattggg
atgaatgttaacctgtatcattaccgaggcaagtggattatgattgaccttggtattggt
tttgccgatgaaactatgccaggtattgagctattaattgctgatgtaagttttattgct
caaaggaagaaagatttgcttggaataataattacgcatgcacatgaagaccactgcggt
gcagtgccttacttgtggaaagagttacaatgtcccatatatacaacaaagttcacagct
aattttctcaaggaaaaactgaaggaatttcggctggaaggtatggtatctgtgaaggag
gtggatataaacggcagtataaatttaagtcctttcactgttgagtttataaatgtaact
cattcaattcctgaagcacattcaatattagttagcactgatgtgggcagcgcgcttcat
actggtgattggaaattcgatcaaaaacctattgttggtttaacttctaatataagtcgt
ttaaaagaaattggtgataaaggtaatctgcttgcagcaatttgtgattcaacaaatgtg
ttaggcaagcataatcctgaatcagaaagtgaaatttataacaatatttataatataata
aggcggtctaaaaaactagttgctgtgtcgttatttgcttcaaacgtggcacggattgaa
acgataggccaagttgcaaaggtactaggtagaaaagtggttttgcttggtaggtccttg
tggagaatagtaagagttgcacaaaatagtgggtatttaaccgattctgttgaattttgt
gaagtaaaagatgtggcagatttgccaagggaaaagttattattaatctgcactggttgc
caaggcgagccaatggcggcaatctcaaaacttgctaataagagtcatcatgcatttaaa
atgcaacaaggtgatacagtaattttttcgtcaaagattattcctggtaatgaaactcgt
gcacatgttatattcaatgctttcattgaaatgggagtggagattgttactgagaaaaca
gaatgtgttcatgcttctggacatccagtcaaggcagagctaagagaaatgtattctttg
ataaaacctaaaatgtctattccagtccatggtgagtatattcatacgcatgcacatgta
aaatttgctaaagagtgtggtgtggaaaaagcaataatgattgcaccgggtgatattgtt
aacttggagaacggaaagaaagttgattcaattaatgttaactattttggtgttgatggt
attttgctacgtcatccggggagtaatgttataagaatgcgtaagaagatgagggatgct
ggaactattgtagtgacagcaattgtaaacaagagaaataaattgctggctaaaccaaaa
gtatttgcgcctggtgttttagaagcagtagaagatgcagctatcatacaaaggatcata
aaggcggttgagtcagcatttaatttacagtcgacaaaaaaagtaagaaataagattgag
agcttaatatttagtatcttaaaggaatatttactgaaaagacctataattgaggtccag
atagaacaggtatga
DBGET
integrated database retrieval system
