Wolbachia endosymbiont strain TRS of Brugia malayi: Wbm0628
Help
Entry
Wbm0628 CDS
T00234
Name
(GenBank) Superfamily I DNA and RNA helicase, UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wbm
Wolbachia endosymbiont strain TRS of Brugia malayi
Pathway
wbm03420
Nucleotide excision repair
wbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Wbm0628
03430 Mismatch repair
Wbm0628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wbm03400
]
Wbm0628
Enzymes [BR:
wbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Wbm0628
DNA repair and recombination proteins [BR:
wbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Wbm0628
MMR (mismatch excision repair)
Other MMR factors
Wbm0628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
ResIII
DUF3452
Motif
Other DBs
NCBI-ProteinID:
AAW71216
UniProt:
Q5GS08
LinkDB
All DBs
Position
817133..819049
Genome browser
AA seq
638 aa
AA seq
DB search
MNDYLSLLNPEQQSAVTKVDGPVLILAGAGTGKTRTITSRIAHIIRNGYAHSDEILAVTF
TNKAANEMVSRVLKLTGTNILWLGTFHAIAAKILRRHADIVGLNPNFTIIGVDDQLQVIK
NIINEVSPNNLSEKHSTIMNTIQKWKEKCLLPSEVEETQLFRPIYIIALKVYHQYQERLK
FLNSVDFGDLLLYNIQLFNQKTEILSYYQGKFKYIMVDEYQDTNVIQYLWLKYLAKEHSN
ICCVGDDDQSIYSWRGAEVKNILKFSDDFKNAKIIKLECNYRSTSHILATASYVINHNKT
RLEKKLWTTNIKGEKVNLIKLWDGKAEARFISEQILKLNKYRFSDMAVLVRATFQTRVLE
EYFIKYSIPYKIISGVKFYERQEVRDVIAYLRLVTNNNDDLAFERIVNRPKRSIGPTTLK
KIYTVAQGNKTSFFEAAKILVNSNQVIEKIKLSLNDFFNKIKAWEEMISVKPLHKFVKTI
ANQSGYIEMLENEEVTGLARIENVKELISSLKNFDNATTFLEHISLVMEVDNMNNDDTVH
VMTLHAAKGLEFPCVFLPGWEEGLFPHQRSFEDKSGKALEEERRLAYVGITRAKEKLIIS
CADRREINNQWQPMYASRFLKELPRENVEVIKSNIAYC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattatctctcactgctaaatccggaacaacaatcagctgtaactaaagtagat
gggccagttttgatactggctggggctggaacaggaaagacaagaacgattacttcaaga
atagcacatataattcgaaatggttacgctcattctgatgagatattggcagtcacattc
acaaacaaagcagcaaatgaaatggtatcaagagtgctcaaactcacgggtacaaatata
ctatggcttggcactttccatgcaattgcagcaaaaattttacgtcgtcacgctgatatt
gtgggcttaaaccccaattttacaattattggcgtggatgaccaactacaagtaataaaa
aatattattaatgaagtaagccccaataatttgtcagaaaaacatagtaccattatgaac
acaattcaaaaatggaaagaaaagtgcttactgccgtcagaagtggaagaaactcaacta
tttaggccaatatacataattgcattaaaagtttatcaccaatatcaggaaaggctaaag
ttccttaactccgttgattttggcgatttactactgtataatatacaactcttcaatcaa
aaaactgaaattctgtcctattatcagggcaagtttaaatatattatggtagatgagtac
caagatacaaatgtaatacaatatctttggctaaaataccttgcaaaagagcactcaaat
atttgttgtgtgggagatgacgatcaatcgatatatagctggcgtggtgcagaggttaaa
aacattttgaaattttccgacgattttaaaaatgcaaaaatcatcaaactagagtgtaat
tacagatcaacatctcatatacttgcaactgcgtcatatgtcatcaatcacaataaaact
cgcttagaaaaaaaattgtggacaacaaacatcaaaggggaaaaggtaaatttaataaaa
ttatgggatggaaaagctgaagcaagattcataagtgaacagatattaaagcttaataaa
tacagattcagcgacatggcagtactggttagggctactttccaaactagagttctggaa
gagtattttataaaatattcgattccctataagattataagtggcgtaaaattctatgaa
cgtcaagaagtcagggatgtaattgcatatttaagactcgttacaaacaataatgatgac
ttagcttttgaaagaatagtgaatcggccaaaaagaagcataggacctaccactttaaaa
aagatatacacggttgctcaaggtaacaaaacttcttttttcgaagcggcaaaaatatta
gttaatagtaatcaggtaattgagaaaattaaactttcactaaatgatttttttaataaa
attaaagcttgggaagaaatgataagtgtcaaaccactacacaagtttgttaaaactata
gcgaaccaatcgggatatattgaaatgcttgaaaatgaagaagtaacaggcttagcacga
atagaaaatgtcaaggagctcatttcatctttaaaaaattttgacaatgctacaactttc
ttggagcatataagcttagttatggaagtggataatatgaataatgacgataccgtacac
gtcatgactcttcacgcagctaaggggcttgaatttccatgtgtgttcttacctggttgg
gaagaagggctatttccccaccaaaggtcttttgaagataaaagtggcaaagccttagaa
gaagaaagaaggcttgcatatgttggaataactagagcaaaggaaaagttaatcatttca
tgtgcagacagaagggaaattaataaccagtggcaaccaatgtacgcttcgcgatttctt
aaagagctgccaagggaaaatgttgaagtaattaagagtaatattgcctactgttga
DBGET
integrated database retrieval system
