Wolbachia endosymbiont strain TRS of Brugia malayi: Wbm0773
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Entry
Wbm0773 CDS
T00234
Name
(GenBank) Helicase subunit of the DNA excision repair complex, UvrB
KO
K03702
excinuclease ABC subunit B
Organism
wbm
Wolbachia endosymbiont strain TRS of Brugia malayi
Pathway
wbm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Wbm0773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wbm03400
]
Wbm0773
DNA repair and recombination proteins [BR:
wbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Wbm0773
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Wbm0773
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
Cas3-like_C_2
AAA_5
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AAW71361
UniProt:
Q5GRL3
LinkDB
All DBs
Position
complement(1018068..1020005)
Genome browser
AA seq
645 aa
AA seq
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MKFQLVTHFQPAGDQPQAIDSLVAGLNDNKRDQVLLGVTGSGKTFTMANVIARTNRPALI
IAHNKTLAAQLYEEMKGFFPHNAVEYFISYYDYYQPEAYLPQTDTYIEKDSVINERIDML
RYSAVCSLLERRDTIVVASVSCIYGLGSPESYLSMTITLSTGDRIRINDFLNDLANLQYK
RSDIRFERGYFRMRGDVIDIFPAYYEDKAWRLLLIGNEIEGISEINAITGNIIKCIDKIT
IFPNSYHITSRETLLRAVQPIREELNERLDYYYSQNKIVEAQRLEQRTNFDIEMMVATGT
CKGIENYSRYLYGMEAGDAPPTLFEYLPEDVILFVDESHVTVPQIGAMYNGNESRKKKLI
DHGFRLPSAFDNRPLKFKEWESMRPQTIYISATPGKYELARTNNLFVEQVIRPTGITDPI
CIVKPAEAQVYDVVHEAQVTIKRGFCVLITTLTKKMAEKLAEHMSELNMKVSYLHSDISA
LERIDIVYKLRSKEIDVLIGVNLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRA
ARNAESRAILYADKVTGSMDRALKETERRRKKQKKYSVLHNVLPKTIIKPISNTLKEKVV
VKVTTIGMNKDTVSSLRKQMLAHAKNLEFEEAAKIKNIIGRINNL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcaactagttacgcattttcaaccagctggagatcaaccgcaggcaatagat
agtctagttgcaggactaaatgacaataaaagagatcaggttttacttggagttactggt
tctgggaagactttcactatggcaaatgttattgcaaggacaaacagacctgctctcatc
attgctcacaataaaactttagcagctcagctttatgaggaaatgaaaggtttttttccc
cataatgctgttgaatacttcatttcttattatgattactatcagcctgaagcttatttg
ccacaaactgacacttatattgaaaaagattctgtaatcaatgaaagaattgatatgctg
cgttattctgccgtttgctcccttttagagcgcagggatacaattgtagttgccagtgtt
tcctgcatatacggtcttggttcgcctgaaagctacctcagtatgaccataactttaagt
actggggatagaattcgtattaatgatttcctgaatgatttagctaatctccagtataag
cgctctgatatcagatttgagagaggatattttagaatgcgcggcgatgttatcgatata
tttcctgcctattatgaagacaaagcttggcgtttattgctgattggtaatgagatagaa
gggatctctgaaattaatgctataacgggtaatattatcaaatgcatagataaaatcacc
atttttcccaatagctatcatattacatcacgtgagactctgttgcgtgcggttcagcca
attagagaagagctgaatgaacgcttggattattactactcgcaaaacaaaattgttgaa
gcacaacgccttgaacagcgtaccaattttgatatcgaaatgatggtagcaacaggaacg
tgtaaaggtattgaaaattattcgcgttatctctatggaatggaagctggagatgcaccg
cctacattgtttgaatatttacctgaggatgtaattttgtttgttgatgaaagtcatgtt
actgttcctcagattggtgcaatgtataatggtaatgaatcacgtaaaaaaaaattgatc
gaccacggcttccggcttccttctgctttcgataaccgtccgttaaagtttaaggagtgg
gagtcaatgcggccgcagactatttacatttcagccactcccggaaaatatgagttggca
aggacgaataacttgttcgtagagcaagttattcgtccaacaggaattacagatccaatc
tgcattgtgaaaccagctgaggctcaagtttacgatgtggttcacgaggcgcaagtgaca
ataaagagaggattttgtgttctaattactacattgaccaaaaaaatggcagaaaagctg
gctgagcatatgagcgagttaaatatgaaagtgagttatttgcattcagatattagtgcg
ctagagagaattgacattgtatacaaattaagatcgaaagaaattgatgttctaatcggt
gttaacttgctgcgggagggtcttgatattccagagtgtggtttggttgcaattctggat
gctgataaagaaggatttttgcgatcagagacttcactcattcaaacgatcggtcgtgct
gcacgtaatgctgaaagcagggcaattttatatgcagataaagtcactggttccatggat
cgtgcattaaaagaaactgaaaggagaagaaaaaaacaaaagaaatatagtgtcttgcat
aatgttttacccaagactataataaaacctatatcaaatactttaaaagaaaaagtggtg
gtgaaggtaacaacaatcggtatgaacaaggatactgtaagcagtttaagaaaacagatg
ttagcacatgccaagaacttagaatttgaagaagcagctaaaatcaaaaatattattgga
aggataaataatctgtga
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