Wielerella bovis: MIS45_03415
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Entry
MIS45_03415 CDS
T08126
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
wbo
Wielerella bovis
Pathway
wbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIS45_03415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wbo03019
]
MIS45_03415
Enzymes [BR:
wbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MIS45_03415
Messenger RNA biogenesis [BR:
wbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MIS45_03415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
ssDNA-exonuc_C
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ULJ69898
LinkDB
All DBs
Position
complement(661346..662740)
Genome browser
AA seq
464 aa
AA seq
DB search
MSKFNELGLGYEITSALAEQGYETPTPIQTAAIPKALAGHDLLAAAQTGTGKTAAFMLPS
LERLKRYANPSTSPAMHPVRMLVLTPTRELADQIDQNTRNYMKNLPLRHTVLFGGVSMDK
QTADLRAGCEIVVATVGRLLDHVKQRHINLNKVEIVVLDEADRMLDMGFIDDIRTIMQML
PKQRQTLLFSATFAPAIRKLAQDFMNTPEIVEVAAQNTTNANVEQHVIAVDAYRKKELLE
RLIVDLQIPQVIVFCKTKQSADQVSRDLVRRGLSANAIHGDKSQQVRLEVLQQFKSGELR
VLVATDVAARGLDIAELPFVINYELPVQAEDYVHRIGRTGRAGADGVAISMMDEYEQKMY
AAIKELTGNELPISRIEGFAPRWEMGSESVSGSLKNEEYKDSAAPYSRRYQQNHDVRESS
YRQRENIVVPDMPKIQNRASTRRRGRERRTCALLQPNFGMNDER
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatttaacgaacttggcttgggatatgaaatcacatctgcacttgccgaacaa
ggttacgaaacacctacccccattcaaactgctgccattcccaaagcattggcaggacac
gatttactcgccgccgcgcaaacaggcacaggcaaaaccgccgcttttatgctacccagc
ttggaacgtctgaaacgctacgccaaccccagcacatcgcccgctatgcaccccgtgcgc
atgctggtgttaacacccacccgcgaattagccgaccaaattgaccaaaacacgcgcaat
tacatgaaaaatctgcccctgcgccacaccgtattattcggcggcgtgagcatggacaag
caaacagcagatttgcgtgcaggctgtgaaattgtcgtagcaaccgttgggcgattgctt
gaccatgtgaagcagcgacacatcaatttaaataaagtagaaattgttgtattagacgaa
gccgaccgcatgttggacatgggttttattgatgatattcgcaccatcatgcaaatgttg
ccaaaacaacgccaaacgctgctattctctgcaacgtttgcaccagccattcgcaaattg
gcacaagattttatgaacacacctgaaatcgtagaagttgccgcacaaaacaccactaat
gccaatgtggagcaacatgttattgcggttgatgcctatcgtaaaaaggaattattggaa
cgcctgattgtggatttgcaaataccccaagttattgtgttctgcaaaaccaaacaatct
gccgaccaagtttcacgtgatttagtgcgccgcggtttgtctgccaacgctattcatggc
gacaaatcacaacaagtgcgtttagaagtattacaacaattcaaatcaggcgaattacgc
gttttggttgcaaccgacgtagcggcacgcggtttagatattgctgaattgccgtttgtg
attaattatgaattgcctgtgcaagcggaagattatgtacaccgtattggacgcacaggt
cgcgcaggtgctgacggtgttgctatttctatgatggacgaatatgaacaaaaaatgtat
gctgccatcaaagaattaacagggaatgaattacccatttcacgaattgaaggttttgca
ccacgttgggaaatggggagtgaatctgtttcaggcagcctgaaaaatgaagaatataaa
gatagcgcagcaccctactctcgccgctatcaacaaaatcatgatgtgcgagaatcatca
tatcgtcagcgtgaaaacattgttgtgccagatatgcctaaaattcaaaatcgtgccagt
acgcgccgtcgtggacgagaacgtcgtacttgtgcgttgttacaacccaattttggcatg
aatgacgaacgataa
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