Wielerella bovis: MIS45_10870
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Entry
MIS45_10870 CDS
T08126
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
wbo
Wielerella bovis
Brite
KEGG Orthology (KO) [BR:
wbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wbo03009
]
MIS45_10870 (rlmD)
Enzymes [BR:
wbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MIS45_10870 (rlmD)
Ribosome biogenesis [BR:
wbo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MIS45_10870 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Methyltr_RsmB-F
Methyltransf_15
MTS
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_4
PCMT
DUF7552
Motif
Other DBs
NCBI-ProteinID:
ULJ69223
LinkDB
All DBs
Position
complement(2233620..2234939)
Genome browser
AA seq
439 aa
AA seq
DB search
MQTTIQSLDYEGRGVTRIDGKTIFVHNALPREIVRIQIKQDKGTFAEADTTAIIQPSEYR
REPACPYYGECGGCALQHLEFSAQVAMKQRVFEEQLQRIGKVFPEQILPPIYGAAWHYRS
RTRLSIFIDKQDVVQIGYQAKRSKRIVPISQCAILPAHVSGSLKTIRAGLQNIHATAPKI
RLQSVEISVGEQVSVLNIISDKKLPENVLIEFSGCLNKITANQSAAPIWQIWLQIGTRAA
EPIAPKTAPKLNYRLPEFALNMPFRAGDFTQINLPMNEVMVSRAIRLLQPQGHERIADLF
CGLGNFTLPIARSGAKVVGIEGADFLTRRAMQNAQANGLTNIQFSTADLFATTPQIVEQL
GYFDKILLDPPRAGAYALVQALHVPYLPKRIVYVSCNPATFARDAAVLVGKGYRFSAAGV
MNLFPHTAHVEAMAVFDLA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaccattcaatcattggattacgaaggacgtggcgtaacacgcattgacggc
aaaaccatctttgttcacaacgctttaccacgcgaaatcgtccgcattcaaatcaagcaa
gacaaaggcacatttgctgaagccgacaccaccgccattatccaaccgtccgaataccgt
cgcgaaccagcttgcccatattatggcgaatgcggcggctgtgctttacaacaccttgaa
ttttcagcgcaagtcgccatgaaacaacgcgtttttgaagagcaactgcaacgcatcggc
aaagtttttcccgaacaaattttgccgccgatttatggtgcagcatggcattatcgcagc
cgcacaagattgtctatttttattgataaacaagatgttgtgcaaatcggctatcaagcc
aaacgcagcaaacgcattgtaccgatttcgcaatgcgccatcttgcctgcacacgtttca
ggcagcctgaaaaccattcgcgcaggtttgcaaaatatccatgccaccgcacccaaaatt
cgtttgcaaagcgtggaaatttctgttggcgagcaagtttctgttttaaatattatttct
gataaaaaattgcctgaaaatgtcttgatagaattttcaggctgcctgaataaaattaca
gcaaaccaatccgctgcaccgatttggcaaatttggctgcaaattggcacacgcgctgcc
gaaccgattgcgccgaaaaccgcgcccaaactcaattacaggctgcctgaatttgcgctg
aatatgccgtttcgcgcgggcgattttacgcaaatcaatttgccgatgaatgaagtgatg
gtttcacgcgccatacgcttattgcagccacaaggacatgaaagaattgccgatttattt
tgcggcttgggtaatttcacgttgccgattgcgcgaagtggcgcaaaagtggtcggcatt
gaaggtgcggattttctcacgcgccgtgcgatgcaaaacgcacaagccaacggtttgacc
aatattcaattttccaccgctgatttattcgctactacaccgcaaattgttgaacaatta
ggttattttgacaaaatattgcttgacccaccacgcgctggcgcatatgccttggtacag
gctttgcacgtgccctatttgcccaaacggattgtatatgtgtcgtgcaatcctgccacg
tttgcgcgtgatgcggcggtattggtaggtaaaggttatcgttttagcgcggctggtgtg
atgaatttatttccgcatacggcgcatgtggaagcgatggcggtgtttgatttggcataa
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