Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis: rho
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Entry
rho CDS
T00101
Name
(GenBank) Transcription
KO
K03628
transcription termination factor Rho
Organism
wbr
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Pathway
wbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
rho
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wbr03021
]
rho
03019 Messenger RNA biogenesis [BR:
wbr03019
]
rho
Transcription machinery [BR:
wbr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
rho
Messenger RNA biogenesis [BR:
wbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
rho
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAC24449
UniProt:
Q8D2Q1
LinkDB
All DBs
Position
complement(357968..359227)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNKLISDLITLGENMGLENLARMRKQDIIFSTLKQHAKIGEDIFGDGVLEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVDEVN
YDKPESSRNKILFENLTPLHANSRLKMERGNGSTEDLTTRVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAQSISYNHPDCVLIVLLIDERPEEVTEMQRLVKGEVIASTFDEPSSRHV
QVSEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTSSEELQKMWILRRIIHPMNEIDGMEFLMNKLSMTKTNNEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaataagctgatttcggatttaattactctcggcgaaaac
atgggattagaaaaccttgctcgcatgcgtaaacaagatattattttttctactttaaaa
caacatgctaaaataggagaggatatttttggagatggagttctagaaatattacaagat
ggatttggatttcttcgctctagcgatagctcttatcttgctggaccagatgatatttat
gtttctcctagtcaaattagaagatttaatttaagaacaggagatacgatttctggaaaa
ataagacctcctaaagaaggagagcgttatttcgcattgcttaaagttgacgaagtaaat
tatgacaaaccagaaagttctagaaataaaattctcttcgaaaacctaactcctttgcat
gcaaattctagattaaaaatggaaagaggtaatggttctaccgaagatttaactacaaga
gtgcttgatttggcagctccaattggaaggggtcaacgtggtttaatagtagctccgcct
aaagctggaaaaacaatgttattacaaaatatagctcaaagcatttcttataatcatcca
gattgtgttcttatagttcttttgatagatgaaagaccagaagaagttacggaaatgcaa
agattggtaaaaggagaagtaatagcatctacctttgatgaaccatcttctagacacgtt
caagtatctgaaatggttatagaaaaagcaaaaagacttgtagaacataaaaaagacgta
ataattttattagattctataacaagactcgcaagagcgtataatacagtagttccagct
tcaggaaaagtgttaacaggtggtgttgatgcaaatgcattacatagaccaaaaaggttt
ttcggggcagcaagaaatatggaagaaggtggaagtttgactataatagcaactgcttta
atagatactggatctaaaatggatgaagtaatatatgaggagtttaaaggaacaggaaat
atggaattacatttatctagaaaaattgctgaaaagagagtttttccagcaattgattat
aatagatctggaactagaaaagaagagttgctaactagttctgaagagcttcagaagatg
tggattcttagaagaattattcatccaatgaatgaaatagatggaatggaatttttgatg
aacaaattatctatgacaaaaacaaataatgaattttttgatatgatgaaaagatcttga
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