Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis: rne
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Entry
rne CDS
T00101
Name
(GenBank) Transcription
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wbr
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Pathway
wbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
rne
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wbr03019
]
rne
03009 Ribosome biogenesis [BR:
wbr03009
]
rne
Enzymes [BR:
wbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
rne
Messenger RNA biogenesis [BR:
wbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
rne
Ribosome biogenesis [BR:
wbr03009
]
Prokaryotic type
rRNA processing factors
rne
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
potato_inhibit
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BAC24234
UniProt:
Q8D3B3
LinkDB
All DBs
Position
complement(93717..96068)
Genome browser
AA seq
783 aa
AA seq
DB search
MKRMLINATQQEELRIALVDGQKLYDLDIENLRYIQKKSNIYKGKITRIEPSLEAVFIDY
GEERHGFLPFKEIAIEYLYKNNIYYNKSNIKDILKENQELIVQIEKEARGNKGAALTTFI
SLAGSYLVLMPNNPKSGGISRHIEGEDRTELKEILYSLEIPNGMGIIIRTAGLGKSIKDL
KLDLSFRLSHWDKIKKAAQKKRAPCLIYRESDVVSRAFRDYLRPDIKEILIDNPKILELS
KEYIISLGRPDFIKKIKLYSGEVPLFSHYQIESQIESAFQREVKLPSGGSIFIDNTEALT
AIDINSAKSTRGIDISETAFNTNLEAVHEISIQLRLRDLGGLIVIDFIDMNTSKHQREVE
KLLKELAKQDRARIQIGQISKFGLLELSRQRMSHSLRESSHYICPRCNGTGTIRDKESLS
LSILRLIEEESIKDNTYKVYTIVPVDIASYLLNEKRDAVSAIEKRKQGVRTVIIPNDKMK
TPNYLVLRVKIGEQSNIPSYLIPKIYESDCINIPNGSFYDKKCYDNQNLFFNELKYTEKN
SSLYFYKSQSKKTNFNNLVKYQNLFKRLIYNLKNLLYILKNQKNFDKKNNIFISENFSCD
SSKDIFNKKIFKEKNIENKNYLNDKKIKNIKKFSENNNDSFFYCSSYEESNKLKIKKNNS
KFTHINYNNKFFSQNKNLNSIIRENLNEKNIKLISNTKNNNIIFNKNKKHLVFTNKIRRI
PKYLRLVCSKKKYQNKSNNFLIKKISYKNKNSNVEKNKIINKNNINKAKIIKKVQIKKKQ
KII
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctaattaatgcaactcaacaagaagaattaagaatagctttagtagat
ggtcaaaaattatatgatttagatattgaaaacttaagatatatacaaaaaaaatccaat
atttataaaggtaaaattactagaatagaacctagtttagaagcagtttttatagattat
ggagaagaacgtcatggatttttaccatttaaagaaattgcaatagaatatctttataaa
aacaacatttattataacaaatctaacataaaagatattttaaaagaaaatcaagaactt
atagttcaaatagaaaaagaagcaagaggaaataaaggagctgctcttactacatttatt
agtcttgcaggaagttatttagttttaatgccaaataaccctaaatctggaggaatttct
cgtcatatcgagggagaagataggacagaacttaaagaaatattgtattctttagaaatt
ccaaacggaatgggtattattataagaacagctggattaggaaaatctattaaagatcta
aaattagatttatcttttagattgagtcattgggataaaataaaaaaagcagcgcaaaaa
aaaagagcaccatgtctaatttatagagaaagcgacgttgtttctagagcatttcgcgat
tatttaaggccggatataaaagaaattttaatagataatcctaaaatattagaattatct
aaagaatatataatttcattaggccgtccagattttattaaaaaaataaaattatacagc
ggggaagttcctttatttagtcattatcaaatagaatctcaaattgaatctgcttttcaa
cgtgaagttaagttgccttctggaggatctatttttattgataatacagaggcattaaca
gctatagatataaattctgctaaatccactagaggaatagatatttctgaaactgctttt
aataccaatctagaagcggttcatgaaatttctatacaattaaggctaagagatttagga
ggattaattgtaattgattttatagatatgaatacttcaaaacaccaaagagaagtagaa
aaattattaaaagaactagcaaaacaagatcgtgctagaatacaaataggacaaatatct
aaatttggtttattagagttatctagacaaagaatgagtcattctttaagagaatctagt
cattatatttgtcctagatgcaatggaactggaactataagagacaaagaatctctttct
ttatcaattttaagattaatagaagaagaatctattaaagataatacatataaagtttat
actattgttccagttgatattgcatcttacttattaaatgaaaaaagagatgcagtaagt
gcaatagaaaaaagaaaacaaggcgtaagaacagttatcattccaaatgataaaatgaaa
actccaaattatttagttttaagagtaaaaataggagaacaatcaaacataccaagttat
ttaataccaaaaatttatgaatcagattgtataaatattcctaatggatctttttatgat
aaaaagtgctacgataatcaaaatttattttttaatgaattaaaatatacagaaaaaaat
agttctttatatttttataaatcgcaaagtaaaaaaacaaactttaataatttagttaaa
tatcaaaatttatttaaacgtttaatttataatttaaaaaatttattatatattttaaaa
aatcagaaaaattttgataaaaaaaataatatttttatatcagaaaatttttcttgtgat
tcttcgaaagatatttttaataaaaaaatttttaaagaaaaaaatattgaaaacaaaaat
tatttaaatgataaaaaaataaaaaatataaaaaaattttcagaaaataataatgattca
tttttttattgttcttcttatgaagaatctaataaattaaaaataaaaaaaaataattca
aaatttactcatattaattataataataaatttttttctcaaaataaaaatttaaattct
attataagggaaaatttaaacgaaaaaaatattaaattaattagtaatacaaaaaataat
aatattatttttaataaaaataaaaaacatcttgtttttactaataaaattagacgtatt
cctaaatatttaagattagtatgtagcaaaaaaaaatatcaaaacaaatcaaataacttt
ttaataaaaaaaatatcttataaaaataaaaattccaacgtagagaaaaataaaataatt
aacaaaaataatataaacaaagctaaaattattaagaaagttcaaataaaaaaaaaacaa
aaaataatatag
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