Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis: rpoD
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Entry
rpoD CDS
T00101
Name
(GenBank) Transcription
KO
K03086
RNA polymerase primary sigma factor
Organism
wbr
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Pathway
wbr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
wbr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
rpoD
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wbr03021
]
rpoD
Transcription machinery [BR:
wbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
rpoD
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
D27-like_C
Motif
Other DBs
NCBI-ProteinID:
BAC24614
UniProt:
Q8D286
LinkDB
All DBs
Position
complement(542374..544179)
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AA seq
601 aa
AA seq
DB search
MEKNQQSQLKLLVTRGKEQGYLTFSEVNDFLPENIIDSHQIEDIIQMINDMGIQVMDEAP
NSENLLLPDSNNNSDEDVAEAAAQVLSNVESEFGKTTDPVRMYMREMGSVQLLTREGEID
LAKRIEYGINQIQCAIVEYPKAIIYLLDQYKKTTTGESKLSELITGFVDPNIVVDSSNID
LNTEDISSEEENNTSEEIDIDKELANKRFIELQEQYKISFNTIKEYGRMHEFSIKEIIYL
ADIFKQFRLVPKQFDYLVFIIRSEIEKIRFYERRIMRICVNICKMPKKFFISLFSGNETN
DVWLKKALSLDKPWSRKLYKLNKPICLILNKLKIIEINSGITIEQAKDINKRMSIGEAKA
KRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYAT
WWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEIGREPTPEELSEKMLIPED
KIRKVLKIAKEPISMETPIGDDEDSHLGDFLEDTSLDLPLDSATSESLRSATHDVLSGLT
AREAKVLKMRFGIDMSTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILRSFLD
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaatcaacagtcacaacttaaactactagtaactcgtggtaaagaacagggc
tacttgactttttccgaagtaaatgattttttaccagaaaatattattgattcccatcaa
atagaagatatcattcaaatgataaatgatatgggaatacaagttatggatgaagctcca
aattcagaaaacttattgcttccagattctaataataattcagacgaagatgtagctgaa
gcagccgctcaggttttatcaaatgtagaatcagaatttggaaaaactacagatccggtt
agaatgtacatgagagaaatgggaagtgtacagctattgacaagagaaggcgaaatagat
cttgctaaacgcatagaatatggaataaatcaaattcaatgtgcgattgtagaatatcca
aaagcaattatttatcttttagatcaatacaaaaaaaccactacaggtgaatcaaaatta
tcagaattaattactggttttgttgatccgaacatagtagttgactcttccaatattgat
ttaaatacggaagatatttctagcgaagaggaaaacaacacttcagaagaaattgatata
gataaagaattggctaataaaagatttattgaattacaagaacaatataaaatatcgttt
aatactataaaagaatatggaagaatgcatgaattttctattaaagaaataatttatctt
gcagatatatttaaacaatttagattagttccaaaacaatttgattatttagtatttata
ataaggtcagaaatagaaaaaattaggttttatgaaagaagaatcatgagaatatgcgtt
aatatatgcaaaatgcctaaaaaattttttatttctttgttttctggaaatgaaacaaat
gatgtttggttgaaaaaagctttatctttagataaaccttggtctagaaaactttataaa
ttgaataaacctatatgtctgatattaaataaattaaaaataatagaaattaattcagga
ataactatagaacaagcaaaagatataaataaaagaatgtctattggagaggcaaaagct
aaaagagctaaaaaagaaatggttgaagcaaatttaagattagtaatatctatagctaaa
aaatacaccaatagaggattgcagtttttagatttaatacaagaaggaaatataggtcta
atgaaagctgtagataaattcgaatacagaaggggttataaattttctacatatgcaaca
tggtggattagacaagcaattaccagatctattgcagatcaagctagaactatcagaata
ccagttcatatgattgaaacaataaataaattaaatagaatatctaggcaaatgctacaa
gaaataggaagagaacctactccagaagaactgtcagaaaaaatgttaataccagaagat
aaaataagaaaagttcttaaaatagcaaaagaaccaatatctatggaaactccaatagga
gatgacgaagattcacatttaggagattttttagaagatacatctttagatttacctctt
gattctgctacatcagaaagtttgcgatccgctactcatgatgtattgtctggtttaaca
gcaagagaagcaaaagtattgaaaatgagatttggaattgatatgagcactgatcatact
ttagaagaagtaggaaaacaatttgatgtaacaagagaaagaattagacaaattgaagca
aaagctttaagaaaattacgtcatccaagtcgttctgaaattttgcgtagctttttagac
gattaa
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