Candidatus Westeberhardia cardiocondylae: WEOB_108
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Entry
WEOB_108 CDS
T09022
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
wca
Candidatus Westeberhardia cardiocondylae
Pathway
wca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WEOB_108 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wca03019
]
WEOB_108 (groL)
03110 Chaperones and folding catalysts [BR:
wca03110
]
WEOB_108 (groL)
03029 Mitochondrial biogenesis [BR:
wca03029
]
WEOB_108 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
wca04147
]
WEOB_108 (groL)
Enzymes [BR:
wca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
WEOB_108 (groL)
Messenger RNA biogenesis [BR:
wca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
WEOB_108 (groL)
Chaperones and folding catalysts [BR:
wca03110
]
Heat shock proteins
HSP60 / Chaperonin
WEOB_108 (groL)
Mitochondrial biogenesis [BR:
wca03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
WEOB_108 (groL)
Exosome [BR:
wca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
WEOB_108 (groL)
Exosomal proteins of other body fluids (saliva and urine)
WEOB_108 (groL)
Exosomal proteins of breast cancer cells
WEOB_108 (groL)
Exosomal proteins of colorectal cancer cells
WEOB_108 (groL)
Exosomal proteins of bladder cancer cells
WEOB_108 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CEN32066
UniProt:
A0A0H5C522
LinkDB
All DBs
Position
I:complement(110899..112551)
Genome browser
AA seq
550 aa
AA seq
DB search
MTAKDVKFGSDSRIKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPMITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDTAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIGAVKELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
SGLQDELDVVEGMQFDRGYLSPYFINKQESGVVELENPYILLADKKISNIREMLPILESV
AKSNKPLLIIAEDVEGEALATLVVNTMRGVVKVAAVKAPGFGDRRKAMMQDIGILTAGTV
ISEEIGLELEKATLEDMGQAKRVLITKDTTTIIDGVGNKSAINSRVAQINQQKDEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHSTRAAVEEGVVAGGGVALI
RVANSIMNLKGDNEDQNVGIKVARRAMEAPLRQIVANAGEEPSVIANTVRSSEGNTGYNA
ATEQYGNMIEMGILDPTKVTRSALQYAASIAGLMITTECMITDLPKEEKNDINSGPSAAS
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacagctaaagacgtaaaattcggtagcgacagtcgcataaagatgctacgcggtgtg
aatgtgttagcggatgcggtgaaagttacattaggaccaaaaggtcgaaacgtagtatta
gacaaatcttttggagcccctatgattactaaagatggtgtatctgttgctagagaaatt
gaattagaagacaaattcgaaaatatgggcgcgcaaatggtgaaagaagttgcctcaaaa
gctaatgatactgctggagatggtactactacagctactgtactcgctcaagccattgtc
aacgaaggattaaaagctgttgctgcaggaatgaatccaatggatctaaaaagaggaata
gataaagcagttatcggagcagtaaaagaactaaagaaactatcagttccttgttctgac
tcaaaagcaattgctcaagttggaactatttctgcgaattctgatgaaacagttggtaaa
ttaattgctgaagcaatggaaaaagtaggaaaagaaggtgtaataactgttgaagaagga
tctggattgcaagatgaattagatgtcgtagaaggtatgcaatttgatagaggttattta
tcaccttacttcattaataaacaagaaagcggagtagttgaattagaaaacccatatata
ttactagcagataaaaaaatatcaaacatcagagaaatgcttccgatactagaatccgtg
gctaaatccaacaaaccattactaatcatcgctgaagatgtagagggggaagctctcgct
acattagtagtaaatactatgcgaggagtggtaaaagtcgctgctgttaaagcgccaggt
ttcggagatagaagaaaagccatgatgcaagatatcggtatattaacagctggtacagta
atttctgaggaaattggtttagaattagaaaaagcaactttagaagatatgggacaagct
aagcgtgttcttattaccaaagatacaaccaccattattgatggagttggaaacaaatcc
gctatcaatagtcgagttgcccaaataaatcaacaaaaagatgaagcaacctctgattat
gatcgagaaaaattgcaagaacgtgtcgctaaactagctggtggagtagcagtaattaaa
gtaggtgctgcaacagaagttgagatgaaagaaaaaaaagcaagagtagaagatgctcta
cattccactagagcagcagtagaagaaggagtagtagctggaggtggtgttgcgttgata
cgagttgcaaatagtataatgaatttaaaaggagacaatgaggatcaaaatgttgggatt
aaagttgctagaagagcaatggaagctcctcttcgtcaaatagtagccaacgcaggagaa
gaaccatctgttattgctaatacagttagaagtagcgaaggaaacactgggtacaacgct
gcaacagagcaatacggaaatatgattgaaatgggtatcttagatccaactaaagttacc
agatcagcattacaatatgcagcttctattgctggacttatgattaccactgaatgtatg
atcactgatcttccaaaagaagaaaaaaatgacataaatagtggtccaagtgcagcaagt
ggcggaatgggtggaatgggaggaatgatgtaa
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